Sequence 1: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006232075.1 | Gene: | Egflam / 365691 | RGDID: | 1306592 | Length: | 1013 | Species: | Rattus norvegicus |
Alignment Length: | 1198 | Identity: | 277/1198 - (23%) |
---|---|---|---|
Similarity: | 454/1198 - (37%) | Gaps: | 268/1198 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 3348 VKTYFVKELVL---MPLPRIRFYPNIPLTVEAGQNLDVHCQVENVRPEDVHWSTDNNRPLPSSVR 3409
Fly 3410 IVGSVLRFVS----------------------ITQAAAG------EYRCS--AFNQYG-NRSQIA 3443
Fly 3444 RVAVKKPADFHQVPQSQLQRHREGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPNNARTDS 3508
Fly 3509 QILVLTNLRPEDAGRYICNSYDVDRGQQL--PEVSIDLQVLRAPQYPYNRFKGGVSLKDTPCMVL 3571
Fly 3572 YICAAATPPPNSPIYLPPQLPAKSR-------DYSLKLDDQSSNLRAGESTDVECYSSDDTYTDV 3629
Fly 3630 VWERSDGAPLSNNVRQVGN-RLVISNVSPSDAGNYVCKCKTDEGDLYTTSYKLEVEDQPHELKSS 3693
Fly 3694 KIVYAKVGANADLQCGADESRQPTYRWSRQYGQLQAGRSLMNEKLSLDSVQANDA--GTYICTAQ 3756
Fly 3757 YADGETADFPNILVVTGAIPQFRQEPRSYMSFPTLPNSSFKFNFELTFRPENGDGLLLFNGQT-R 3820
Fly 3821 GSGDYIALSLKDRYAEFRFDFGGKPMLVRAEEPLALNEWHTVRVSRFKRDGYIQVDEQHPVAFPT 3885
Fly 3886 LQQIPQLDLIEDLYIGGVPN--WELLPADAVSQQVGFVGCISRLTLQGRTVEL----IREAKYKE 3944
Fly 3945 GITDCRP--CAQGPCQNKGVCLESQTEQAYTCICQPGWTGRDCAIEGTQCTPGVCGAGRCENTEN 4007
Fly 4008 DMECLCPLNRSGDRCQYNEILNEHSLNFKGNSFAAYGTP-------KVTKVNITLSVRPASLEDS 4065
Fly 4066 VILYTAESTLPSGDYLALVLRGGHAELLINTAARLDPVVVRSAEPLPLNRWTRIEIRRRLGEGIL 4130
Fly 4131 RVGDGPERKAKAPGSDRILSLKTHLYVGG---YDRSTVKVNRDVNITKGFDGCISRLYNFQKPVN 4192
Fly 4193 LLADIKDAANIQSCGETNMIGGDEDSDNEPPVPPPTPDVHENELQPYAMAPCASDPCENGGSCSE 4257
Fly 4258 QEDVAVCSCPFGFSGKHCQ------------EHLQLGFNASFRGDGYVELNRSHFQPALEQSYTS 4310
Fly 4311 MGIVFTTNKPNGLLFWWGQEAGEEYTGQDFIAAAVVDGYVEYSMRL-DGEEAVIRNSDIRVDNGE 4374
Fly 4375 RHIVIAKRDENTAILEVDRM-LHSGETRPTSKKSMKLPGNVFVGGAPDLEVFTGFRYKHNLNGCI 4438
Fly 4439 VVVEGETVGQINLSSAAVNGVNANVCPA 4466 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
LDLa | 532..564 | CDD:238060 | |||
LDLa | 571..606 | CDD:238060 | |||
LDLa | 616..650 | CDD:238060 | |||
LDLa | 704..739 | CDD:238060 | |||
LDLa | 813..847 | CDD:238060 | |||
LDLa | 852..887 | CDD:238060 | |||
LDLa | 902..936 | CDD:238060 | |||
LDLa | 956..990 | CDD:238060 | |||
LDLa | 997..1030 | CDD:238060 | |||
LDLa | 1033..1067 | CDD:238060 | |||
LDLa | 1072..1105 | CDD:238060 | |||
LDLa | 1133..1165 | CDD:238060 | |||
LDLa | 1182..1215 | CDD:238060 | |||
LDLa | 1221..1251 | CDD:238060 | |||
LDLa | 1252..1286 | CDD:238060 | |||
LDLa | 1292..1326 | CDD:238060 | |||
IG | 1344..1421 | CDD:214652 | |||
Ig | 1344..1405 | CDD:299845 | |||
LDLa | 1439..1473 | CDD:238060 | |||
LDLa | 1479..1513 | CDD:238060 | |||
LDLa | 1522..1556 | CDD:238060 | |||
IG_like | 1566..1649 | CDD:214653 | |||
Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | |||
Laminin_B | 1748..1864 | CDD:278481 | |||
EGF_Lam | 1935..1989 | CDD:238012 | |||
Laminin_B | 2113..2238 | CDD:278481 | |||
EGF_Lam | <2250..2276 | CDD:238012 | |||
EGF_Lam | 2284..2333 | CDD:238012 | |||
Laminin_EGF | <2369..2399 | CDD:278482 | |||
Laminin_B | 2465..2587 | CDD:278481 | |||
I-set | 2686..2772 | CDD:254352 | |||
Ig_2 | 2689..2771 | CDD:290606 | |||
Ig | 2779..2865 | CDD:299845 | |||
IG_like | 2798..2864 | CDD:214653 | |||
Ig | 2882..2965 | CDD:299845 | |||
IG_like | 2882..2950 | CDD:214653 | |||
Ig | 2977..3061 | CDD:299845 | |||
IG_like | 2984..3058 | CDD:214653 | |||
IG_like | 3074..3152 | CDD:214653 | |||
Ig | 3086..3153 | CDD:299845 | |||
I-set | 3155..3243 | CDD:254352 | |||
IGc2 | 3171..3233 | CDD:197706 | |||
IG | 3371..3447 | CDD:214652 | 25/106 (24%) | ||
IGc2 | 3377..3437 | CDD:197706 | 22/89 (25%) | ||
Ig | 3456..3534 | CDD:299845 | 15/77 (19%) | ||
IG | 3465..>3526 | CDD:214652 | 10/60 (17%) | ||
Ig | 3603..3665 | CDD:299845 | 14/62 (23%) | ||
IG | 3610..3683 | CDD:214652 | 14/73 (19%) | ||
IG | 3696..3762 | CDD:214652 | 13/67 (19%) | ||
Ig | 3704..3771 | CDD:299845 | 14/68 (21%) | ||
LamG | 3784..3929 | CDD:238058 | 51/147 (35%) | ||
EGF | 3952..3984 | CDD:278437 | 10/31 (32%) | ||
LamG | 4032..4185 | CDD:238058 | 43/162 (27%) | ||
Laminin_G_2 | 4315..4444 | CDD:280389 | 36/130 (28%) | ||
Egflam | XP_006232075.1 | FN3 | 36..133 | CDD:238020 | 25/101 (25%) |
FN3 | 142..236 | CDD:238020 | 23/130 (18%) | ||
LamG | 387..537 | CDD:238058 | 52/154 (34%) | ||
EGF_CA | 556..598 | CDD:238011 | 12/42 (29%) | ||
Laminin_G_2 | 637..763 | CDD:280389 | 36/136 (26%) | ||
EGF_CA | 786..816 | CDD:238011 | 12/29 (41%) | ||
Laminin_G_2 | 864..989 | CDD:280389 | 36/129 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D17288at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |