Sequence 1: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022152.3 | Gene: | agr-1 / 3565243 | WormBaseID: | WBGene00018304 | Length: | 1473 | Species: | Caenorhabditis elegans |
Alignment Length: | 1376 | Identity: | 273/1376 - (19%) |
---|---|---|---|
Similarity: | 398/1376 - (28%) | Gaps: | 502/1376 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 848 ALCKCSGDKYKCQRGGGCIPKSQVCDGKPQCHDRSD----------ESACHLHGR-----LNKTR 897
Fly 898 LGVKCLESQYQCGDGSCISGYKRCNGIHD--CADASDEYNCIYDYEDTYDTDPNNNPLNECDILE 960
Fly 961 FECDYSQCLPLEKKCDGYADCEDMSDELECQS----YTDHCLESEFECDS----------YCLPR 1011
Fly 1012 DQLCNG--IPN---CQDGSDERNCTFCRE-----DAYLCNTGECVADNQRCNGIADCADGSD--- 1063
Fly 1064 --ERHCARIYCPPNKLACN--GTCVSRRIKCDGIRDCLDGYDEMYCPETNNHYPTQNVNVIRPKL 1124
Fly 1125 GPN---------PIPKSCR-------PHEWQCANLEC--------------IDSSLQCNEIKDCS 1159
Fly 1160 DGSDEELSVCFGTATT-----RLKPSDCSPEQ-------FYCDESCYNRSVRCNGHVDCSDGSDE 1212
Fly 1213 -VGCSLP--CPQHQCPSGRCYTESERCDRHRHCEDGSDEANCCYANQFRCNNGDCVSGSAPCNGY 1274
Fly 1275 SECSDHSDELNCGGTQECLPNQFR----CNSGQCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRP 1335
Fly 1336 NQLNLKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNGRLEIPNIRVEDA 1400
Fly 1401 GTYVCEAVGYASYIPGQQVTVNLNVERYNDVGSRPESAC----TEYQATCMNGECIDKSSICDGN 1461
Fly 1462 PDCSDASDEQSCSLGLKCQPNQFMCSNSKCVDRTW----------RCDGENDCGDNSDETS-CDP 1515
Fly 1516 EPSGAPCRYNEFQCRSGHCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQSVSLLEYEVLELT 1580
Fly 1581 CVATGTPTPTIVWRLNWGHVPDKCESKSYGGTGTLR-CPDMRPQDSGAYS--CEIINTRGTHFVN 1642
Fly 1643 PDTIVTVRPVRTDVCEAGFFNMLAR-----------------KAEEC----VQC----------- 1675
Fly 1676 ----------FCFGVAK--ACDSANLFT------------------YAIHPPI------LSHRVV 1704
Fly 1705 SVELSPL------RQIVINEAAPGQD-LLTLLHGV----QFRATNVHF----------------S 1742
Fly 1743 GRETPYLALPADYMGNQLKSYGGNLRYEVNYRGSGRPVN---------GPDVIIT----GNRFTL 1794
Fly 1795 TYRVRTQPGQNNRVSIPFVP---GG----WQKPDGRKASREEIMMILANVDNILIRLG------- 1845
Fly 1846 ------------YLDSTAREVDL-INIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCESCASG 1897
Fly 1898 YVRQPGGPWLGHC----VPFIPDSCPSGTYGDPRRGVPCKE------CPCPLTGSNNFASGCQQS 1952
Fly 1953 PDGDVVCRCNE 1963 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
LDLa | 532..564 | CDD:238060 | |||
LDLa | 571..606 | CDD:238060 | |||
LDLa | 616..650 | CDD:238060 | |||
LDLa | 704..739 | CDD:238060 | |||
LDLa | 813..847 | CDD:238060 | |||
LDLa | 852..887 | CDD:238060 | 11/44 (25%) | ||
LDLa | 902..936 | CDD:238060 | 7/35 (20%) | ||
LDLa | 956..990 | CDD:238060 | 8/33 (24%) | ||
LDLa | 997..1030 | CDD:238060 | 14/47 (30%) | ||
LDLa | 1033..1067 | CDD:238060 | 9/43 (21%) | ||
LDLa | 1072..1105 | CDD:238060 | 9/34 (26%) | ||
LDLa | 1133..1165 | CDD:238060 | 8/52 (15%) | ||
LDLa | 1182..1215 | CDD:238060 | 8/40 (20%) | ||
LDLa | 1221..1251 | CDD:238060 | 5/29 (17%) | ||
LDLa | 1252..1286 | CDD:238060 | 3/33 (9%) | ||
LDLa | 1292..1326 | CDD:238060 | 10/37 (27%) | ||
IG | 1344..1421 | CDD:214652 | 11/76 (14%) | ||
Ig | 1344..1405 | CDD:299845 | 7/60 (12%) | ||
LDLa | 1439..1473 | CDD:238060 | 6/37 (16%) | ||
LDLa | 1479..1513 | CDD:238060 | 8/44 (18%) | ||
LDLa | 1522..1556 | CDD:238060 | 8/33 (24%) | ||
IG_like | 1566..1649 | CDD:214653 | 15/85 (18%) | ||
Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | 13/77 (17%) | ||
Laminin_B | 1748..1864 | CDD:278481 | 29/155 (19%) | ||
EGF_Lam | 1935..1989 | CDD:238012 | 8/29 (28%) | ||
Laminin_B | 2113..2238 | CDD:278481 | |||
EGF_Lam | <2250..2276 | CDD:238012 | |||
EGF_Lam | 2284..2333 | CDD:238012 | |||
Laminin_EGF | <2369..2399 | CDD:278482 | |||
Laminin_B | 2465..2587 | CDD:278481 | |||
I-set | 2686..2772 | CDD:254352 | |||
Ig_2 | 2689..2771 | CDD:290606 | |||
Ig | 2779..2865 | CDD:299845 | |||
IG_like | 2798..2864 | CDD:214653 | |||
Ig | 2882..2965 | CDD:299845 | |||
IG_like | 2882..2950 | CDD:214653 | |||
Ig | 2977..3061 | CDD:299845 | |||
IG_like | 2984..3058 | CDD:214653 | |||
IG_like | 3074..3152 | CDD:214653 | |||
Ig | 3086..3153 | CDD:299845 | |||
I-set | 3155..3243 | CDD:254352 | |||
IGc2 | 3171..3233 | CDD:197706 | |||
IG | 3371..3447 | CDD:214652 | |||
IGc2 | 3377..3437 | CDD:197706 | |||
Ig | 3456..3534 | CDD:299845 | |||
IG | 3465..>3526 | CDD:214652 | |||
Ig | 3603..3665 | CDD:299845 | |||
IG | 3610..3683 | CDD:214652 | |||
IG | 3696..3762 | CDD:214652 | |||
Ig | 3704..3771 | CDD:299845 | |||
LamG | 3784..3929 | CDD:238058 | |||
EGF | 3952..3984 | CDD:278437 | |||
LamG | 4032..4185 | CDD:238058 | |||
Laminin_G_2 | 4315..4444 | CDD:280389 | |||
agr-1 | NP_001022152.3 | KAZAL | 172..220 | CDD:197624 | 13/55 (24%) |
KAZAL | 251..301 | CDD:197624 | 11/54 (20%) | ||
KAZAL | 327..371 | CDD:197624 | 9/43 (21%) | ||
KAZAL | 400..445 | CDD:197624 | 9/44 (20%) | ||
KAZAL | 472..516 | CDD:197624 | 9/43 (21%) | ||
KAZAL | 547..592 | CDD:197624 | 11/70 (16%) | ||
KAZAL | 612..660 | CDD:197624 | 17/133 (13%) | ||
EGF_Lam | 670..716 | CDD:238012 | 9/58 (16%) | ||
EGF_Lam | 722..>759 | CDD:238012 | 10/41 (24%) | ||
KAZAL | <819..852 | CDD:197624 | 10/42 (24%) | ||
LamG | 1081..1236 | CDD:238058 | 31/158 (20%) | ||
LamG | 1289..1450 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D17288at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |