DRSC/TRiP Functional Genomics Resources

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Protein Alignment trol and Hspg2

DIOPT Version :10

Sequence 1:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster
Sequence 2:XP_038967229.1 Gene:Hspg2 / 313641 RGDID:621770 Length:4545 Species:Rattus norvegicus


Alignment Length:4533 Identity:1089/4533 - (24%)
Similarity:1608/4533 - (35%) Gaps:1551/4533 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1292 CLPNQFRCNS-GQCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESREV 1355
            |...:|.|:| .:||:...||:.|.||:|.|||.||....::       :.:.| |.::|.|...
  Rat   216 CTETEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEAVSE-------ISSLP-SAVVKVSPLP 272

  Fly  1356 IFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNGRLEIPNIRVEDAGTYVCEAVGYASYIPGQQVT 1420
            :              |  |....|||... ...:..:||                   :||    
  Rat   273 L--------------W--PEAATLPPPVM-HGPQFLLPN-------------------VPG---- 297

  Fly  1421 VNLNVERYNDVGSRPESACTEYQATCMNGECIDKSSICDGNPDCSDASDEQSCSLGLKCQPNQFM 1485
                           .:||...:|:|.:|.||.:..:|||..||.|.|||..|.....|:||:|.
  Rat   298 ---------------PTACGPQEASCHSGHCIPRDYLCDGQEDCRDGSDELGCGPPPPCEPNEFS 347

  Fly  1486 CSNSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRS-GHCIPKSFQCDNVPDCTD 1549
            |.|..|..:.|||||:.||.|::||.:|..:..|..|...:|||.| ..|||.||.||...||.|
  Rat   348 CENGHCALKLWRCDGDFDCEDHTDEANCPVKHPGEVCGPTQFQCVSTNRCIPASFHCDEETDCPD 412

  Fly  1550 GTDEVGCMAPLPIRPPPQSVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVP--DKCESKSYGGT 1612
            .:||.|||.|..:.||.||:.....:.:..||||||.|||.|.|||||||:|  .:....|.||.
  Rat   413 RSDEFGCMPPQVVTPPQQSIQASRGQTVTFTCVATGVPTPIINWRLNWGHIPVNPRVTMTSEGGR 477

  Fly  1613 GTLRCPDMRPQDSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNMLARKAEECVQCFC 1677
            |||...|::..|.|||:||.:|:||..|..||.::.:.|.| ..|..|.|.:  ..:..|:.|||
  Rat   478 GTLIIRDVKEADQGAYTCEAMNSRGMVFGIPDGVLELVPQR-GPCPDGHFYL--EDSASCLPCFC 539

  Fly  1678 FGVAKACDSANLFTYAIH----------------------PPILSHRVVSVELSPL--------- 1711
            |||...|.|:..|...|.                      ||:.|   ..:::.|.         
  Rat   540 FGVTNLCQSSRRFRDQIRLNFDQPSDFKGVNVTMPSQPGVPPLSS---TQLQIDPTLQEFQLVDL 601

  Fly  1712 -RQIVINEAAPGQDLLTLLHGVQFRATNVHFSGRETPYLALPADYMGNQLKSYGGNLRYEVNY-- 1773
             |:.::::|                            :.|||..::||::.||||.|||:|.|  
  Rat   602 SRRFLVHDA----------------------------FWALPKQFLGNKVDSYGGFLRYKVRYEL 638

  Fly  1774 -RGSGRPVNGPDVIITGNRFTLTYR--VRTQPGQNNRVSIPFVPGGWQKPDGRKASREEIMMILA 1835
             ||...||..||||:.|..:.|..|  ..|.||..|:..:......|....||...|.|::..||
  Rat   639 ARGMLEPVQKPDVILVGAGYRLHSRGHTPTHPGALNQRQVQLSEEHWVHESGRPVQRAEMLQALA 703

  Fly  1836 NVDNILIRLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCESCASGYVR 1900
            :::.:|::..| ::....|.|.:|.:|:..|.....|.|..||:|:||.||.|.|||||.:.:.|
  Rat   704 SLEAVLLQTVY-NTKMTSVGLSDIVMDTTVTYTTIHGRAHSVEECRCPIGYSGLSCESCDAHFTR 767

  Fly  1901 QPGGPWL-------------------GHCV--------PFIPDSCPSGTYGDPRR--GVPCKECP 1936
            .||||:|                   |||:        |.. |.|..|.:||..:  ...|:.||
  Rat   768 VPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQC-DKCKPGFFGDATKATATACRPCP 831

  Fly  1937 CP-LTGSNNFASGCQQSPDGDVVC-RCNEGYTGRRCEQCAAGYQGNPLAAGGICRRIPDTS---- 1995
            || :..|..|:..|....||...| .|..||||||||.||.||:|||:..||.||  |...    
  Rat   832 CPYIDASQRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYEGNPIQPGGKCR--PSNQELVR 894

  Fly  1996 CNVDGTYSVHSNGTCQCKDSVIGEQCDTCKSKSFHLNSFTYTGCIECFCSGVGLDCDSSTWYRDQ 2060
            |:..|:.|. :...|:||::|:|..|:.|...||||:.....||::|||.||...|.||:|.|.|
  Rat   895 CDERGSLSA-TGEACRCKNNVVGRSCNECSEGSFHLSKQNPDGCLKCFCMGVSRQCSSSSWSRAQ 958

  Fly  2061 VTSTFGRSRVDHGFVLVTNYMQPTPDTVPVSMAAEPNALSFIGSADQSGNTLYWSLPAAFLGNKL 2125
            |   .|.|.....|.| ||.......:..||..| |..|.|....:......:|||||:|.|:|:
  Rat   959 V---LGASVQPSQFTL-TNAAGTHTTSEGVSSPA-PGELLFSSFHNLLSEPYFWSLPASFRGDKV 1018

  Fly  2126 SSYGGKLTYTLSYSPLPNGIMSRNSAP----DVVIKSGEDLRLIHYRKSQVVPSVANTYSVEIKE 2186
            :||||:|.:|::..|.|      .|||    .:|:..|.::.|.|:...:..|...:.:.|..:|
  Rat  1019 TSYGGELRFTVTQRPRP------GSAPLHRQPLVVLQGNNIVLEHHASREPSPGQPSNFIVPFQE 1077

  Fly  2187 SAWQRGDEVVANREHVLMALSDITAIYIKATYTTSTKEASLRQVTLDVATPTNLGTPRAVEVEQC 2251
            ..|||.|...|.|||:||||:.|.|:.|:|::|....|:.|..:::|||.|.|.|...|.|||.|
  Rat  1078 QVWQRPDGQPATREHLLMALAGIDALLIQASHTQQPAESRLSGISMDVAVPENTGQDPAREVEHC 1142

  Fly  2252 RCPEGYLGLSCEQCAPGYARDPEGGIYLGLCRPCECNGHSKYCNSDTGDCEECSDNTEGPSCERC 2316
            .||.||.|.||:.|..||.| ...|:|||.|..|.|:|||:.|..:||.|:.|..:|||.|||:|
  Rat  1143 TCPPGYRGPSCQDCDTGYTR-VASGLYLGTCERCNCHGHSETCEPETGACQSCQHHTEGASCEQC 1206

  Fly  2317 AAGYVGDATRGTIYDCQP-------------------DEGYPI---------------------- 2340
            ..||.||..|||..||||                   .:|:|.                      
  Rat  1207 QPGYYGDPQRGTPQDCQPCPCYGTPAAGQASHTCFLDTDGHPTCDSCSPGHSGRHCERCAPGYHG 1271

  Fly  2341 -PS-----------PPAPGNQTLECTAYCQIEGIYDCRGNECLCKRNVIGDQCDQCRPGTYGLSA 2393
             ||           |..||   .:|..:..|....|..| :|.||..|.|..|..|||..:.|||
  Rat  1272 NPSQGQPCHRDGQVPEVPG---CDCDPHGSISSQCDATG-QCQCKAQVEGRTCSHCRPHHFHLSA 1332

  Fly  2394 QNQDGCKECYCSGLASQCRSAALYRQLI-----PVDF---------------------------- 2425
            .|.:||..|:|.|:..||.|::..||||     |.||                            
  Rat  1333 SNPEGCLPCFCMGVTQQCTSSSYSRQLISTHFAPGDFQGFALVNPQRNSQLTGGFTVEPVPDGAR 1397

  Fly  2426 ----------------------------------------------------ILNAPLITDESG- 2437
                                                                :.:..::.|..| 
  Rat  1398 LSFSNFAHLGQESFYWQLPETYQGDKREAHFARLRRAHQNRTSLSEEEWRAAVASGRILGDTEGR 1462

  Fly  2438 -------AVQDTENLI------------------------------------------------- 2446
                   .|.:.:..:                                                 
  Rat  1463 GRAQRASQVDEAQRRVDAEIWQLLAGFAAHPHPPPRGLRPNPQLATALRAGPPSSSSSSSPSSSS 1527

  Fly  2447 ------PDISRNMYTYTHTSYLP---KYWSLRGSVLGNQLFSYGGRLSYSLIVESYGNYERGH-- 2500
                  |..|:...:|...|.||   .||.|..:.|||::.:|||:|.|:|   ||.:..:|.  
  Rat  1528 FTSLPSPAGSQFSLSYEGFSLLPGSLYYWQLPRAFLGNKVAAYGGKLRYTL---SYTSGPQGSPL 1589

  Fly  2501 ---DIVLIGNGLKLIWSRP--DGNENQEEYNVRLHEDEQWTRQDRESARPASRSDFMTVLSDLQH 2560
               ||.:.||.:.|:.|:|  .|.| :..|.: :..:|.|.|.|   .:||:|...:..|:||..
  Rat  1590 SDPDIQITGNNIMLVASQPALQGPE-RRSYEI-IFREEFWRRPD---GQPATREHLLMALADLDE 1649

  Fly  2561 ILIRATPRVPTQSTSIGNVILESAVTTRTPGAT---HASDIELCQCPSGYVGTSCESCAPLHYRD 2622
            :|:|||.....::.||..|.||.|    .||.:   .|.::|.|:||.||||.||:.|||.:.|.
  Rat  1650 LLVRATFSSVPRAASISAVSLEVA----QPGPSGGPQALEVEECRCPPGYVGLSCQDCAPGYTRT 1710

  Fly  2623 ASG------------------------------------------------------SCSLCPCD 2633
            .||                                                      .|..|.|.
  Rat  1711 GSGLYLGQCELCECNGHSEVCHPETGACTGCQHNTVGEFCETCATGYYGDATAGTPEDCQPCACP 1775

  Fly  2634 VSNTE-----SCD-LVSGGYVECRCKARWKGDRCREID---TNDPTDIGTEDPVLTQIIVSIQ-K 2688
            ::|.|     :|: |.:|||....|:..:.|..|.:..   ..:|...|.....||:..:.:| .
  Rat  1776 LTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPGYEGNPNVQGGRCQPLTKESLEVQIH 1840

  Fly  2689 PEITIVPVGGSMTLSCSGRMRWSNSPVIVNWYKENSR-LPENVEV--QGGNLYLYDLQVSDSGVY 2750
            |..::||.||..:|.|...   .:.|....|.:|:.| ||...:.  ||..|:...:|.||:|||
  Rat  1841 PSRSVVPQGGPHSLRCQVN---GSPPHYFYWSREDGRPLPSGAQQRHQGSELHFPSVQPSDAGVY 1902

  Fly  2751 ICQAVN-----NETASVF-----KDTVSITITRYAQEMLA------------------------- 2780
            ||...|     |..|.:.     ...:::|:.....:.:.                         
  Rat  1903 ICTCRNLIHTSNSRAELLVAEAPSKPITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRL 1967

  Fly  2781 -----------------------------------RYEKDQ-----------LSPAEIVNL-PSH 2798
                                               .:..||           .|.|.:.:: |..
  Rat  1968 HNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQVSGTSTAPVASIHPPQ 2032

  Fly  2799 VTFEEYVNNEIICEVLGNPAP-------------------------------------------- 2819
            :|.:.....|..|...|||.|                                            
  Rat  2033 LTVQPGQLAEFRCSATGNPTPTLEWIGGPSGQLPTKAQIHNGILRLPAIEPSDQGQYLCRALSSA 2097

  Fly  2820 ----------------------------------------------RVTWARVDGHADAQS---- 2834
                                                          .:||.:..|....|:    
  Rat  2098 GQHVVRAMLQVHGGSGPRVQVSPERTQVHEGRTVRLYCRAAGVPSASITWRKEGGSLPPQARSEN 2162

  Fly  2835 ----------------------------------------------------------------- 2834
                                                                             
  Rat  2163 TDIPTLLIPAIRVADSGFYLCVATSPTGTAQARIQVVVLSASGASSVPVRIESSSPSVTEGQTLD 2227

  Fly  2835 -------------------------TRTYDNRLIFDSPRKSDEGRYRCQAENDQNRDEKYVIVYV 2874
                                     .:.:.:||.......:|.|.|.|:.|:|....|..::|.|
  Rat  2228 LNCAVMGLTYTQVTWYKRGGSLPPHAQVHGSRLRLPQVSPADSGEYVCRVESDLGPKEASIVVSV 2292

  Fly  2875 --------------QSNPP---------------------------------------------- 2879
                          .|.||                                              
  Rat  2293 LHSPHSGPSYTPATSSTPPIRIESSSSHVAEGQTLDLNCVVPGQAQVTWRKRGGSLPARHQTHGS 2357

  Fly  2880 -----QPPPQQDRLY------------------------------ITPEEINGLA-----GESFQ 2904
                 |..|.....|                              :.|..|...:     |::..
  Rat  2358 LLRLHQVSPADSGEYVCHVLLGSEHIETSVLVAIEPAVSIPAPGPVPPVRIESSSPTVAEGQTLD 2422

  Fly  2905 LNCQFTSVASLRYDWSHNGRSLSSSPARNVEIRGNTLEVRDASESDSGVYTC------------- 2956
            |||.....|..:..|...|.||   |||: ::||:.|.:..||.:|:|.|.|             
  Rat  2423 LNCVVAGQAHAQVTWYKRGSSL---PARH-QVRGSRLYIFQASPADAGEYVCRAGNGQEATITVK 2483

  Fly  2957 --------VAY---DVRTRRNFTESARV---------------------------NIDRREE--- 2980
                    :||   ...|.|..:.|:.|                           ::..|.:   
  Rat  2484 VTGNQGANIAYPPGSTPTIRIESSSSHVAEGQTLDLNCVVQGQAHAQVTWHKRGGSLPARHQTHG 2548

  Fly  2981 -----------------------------------QPFGNKPI--------IESLEQNILIIQGE 3002
                                               :|.|:.|.        |||...:  :.:|:
  Rat  2549 SLLRLHQVSPVDSGEYVCRVEGGPVPLESSVLVAIEPAGSVPALGVTPPVRIESSSSH--VSEGQ 2611

  Fly  3003 DYSITCEASGSPYPSIKWAKVHDFMP--ENVH---------------------ISG--------- 3035
            ...:.|..:|..:|.|.|.|....:|  ..||                     :||         
  Rat  2612 SLDLNCLVAGQTHPQISWHKRGGSLPARHQVHGSRLRLLQVTPADSGEYVCRVVSGSGTHEASVL 2676

  Fly  3036 ------------------------------------NVLT----------------------IYG 3042
                                                |.|.                      |.|
  Rat  2677 VTIQQHLSPSHPQSVVHPVRIESSSPSLANGHTLDLNCLVASLTPHTITWYKRGGSLPSRHQIVG 2741

  Fly  3043 ARFE-------NRGVYSCVAENDHGSDLSSTSIDIEPRERPSVKIVSAPLQ------TFSVGAPA 3094
            :|..       :.|.|.|...|..||..:|..:.||.|....|..||.|::      |.:.|...
  Rat  2742 SRLRIPQVTPADSGEYVCHVSNGVGSQETSLIVTIESRGPSHVPSVSPPMRIETSSPTVTEGQTL 2806

  Fly  3095 SLYCTVEGIPDPTVEWVRVDGQPLSPRHKIQSPGYMV-IDDIQLEDSGDYECRAKNIVGEATGVA 3158
            .|.|.|.|.|..|:.|.:..|. |..||  |:.|..: :..:.:.|||:|.|||.|.:.......
  Rat  2807 DLNCVVVGRPQATITWYKRGGS-LPFRH--QAHGSRLRLHQMSVADSGEYVCRANNNIDAQETSI 2868

  Fly  3159 TITVQ----------EPTLVQIIPDNRDLRLTEGDELSLTCVGSGVPNPEVEWVNEMALKRDLYS 3213
            .|:|.          .|..::|  ::....:.||..|.|.||..|..:.:|.|     .||....
  Rat  2869 MISVSPNTNAPSASASPVPIRI--ESSSSHVAEGQTLDLNCVVPGQAHAQVTW-----HKRGGSL 2926

  Fly  3214 PPSNTA---ILKIYRVTKADAGIYTCHGKNEAGSDEAHVRVEVQERRGDI---GGVDDDSDRDPI 3272
            |..:.|   .|::|:|:.||:|.|.|...:.:|..||.|.|.:.....::   |||      .||
  Rat  2927 PAHHQAHGSRLRLYQVSPADSGEYVCRVLSSSGPLEASVLVSITASASNVHVPGGV------PPI 2985

  Fly  3273 NYNPPQQQ------------NPG-------IHQPGS---------------NQLLATDIGD---- 3299
            .......|            .||       .|:.|.               |::...|.|:    
  Rat  2986 RIETSSSQVAEGQTLDLTCVVPGQAHAQVTWHKRGGSLPAGHQVHGHILRLNRVSPADSGEYSCQ 3050

  Fly  3300 ----------NVTLTCDMFQP----------------------------LN----------TRWE 3316
                      :|.:|.:..||                            ||          ..|.
  Rat  3051 VTGSSGTLEASVLVTIEASQPSPIPAPGLAQPIYIESSSSHLAEGQTVDLNCVVPGQAHAQVTWH 3115

  Fly  3317 RVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIG-----RDGNVK---------TYFVKELV 3367
            : .|:.||....|..:.|.:..:...:.|:|.|...|     .:.:.|         :|.::..|
  Rat  3116 K-RGSSLPARHQTHGSLLRLYHISPADSGEYVCQVAGSSHPEHEASFKITVPASEGSSYRLRSPV 3179

  Fly  3368 LMPLPRIRFYPNIPLTVEAGQNLDVHCQV-ENVRPEDVHWSTDNNRPLPSSVRIV--GSVLRFVS 3429
            :...|     |:  .||:.||:....|.: |...|..:.|.| .|:.|..:|.|.  ||::..|.
  Rat  3180 ISIEP-----PS--STVQQGQDASFKCLIHEGATPISLEWKT-RNQELEDNVHISPNGSIMTIVG 3236

  Fly  3430 ITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRH-REGENIQLQCTVTDQ---- 3489
            ...:..|.|||.|.|.||....:..:.|..|.....:|:..:  | :.|::|.|:|..:.:    
  Rat  3237 ARPSNHGAYRCVASNVYGVAQSVVNLIVHGPPTVSVLPEGPV--HVKMGKDITLECVSSGEPRSS 3299

  Fly  3490 ----------------YGV-----------------------------RAQDNVE---------- 3499
                            :|:                             .||..||          
  Rat  3300 PRWTRLGIPVKLEPRMFGLMNSHAMLKIASVKPSDAGTYVCQAQNALGTAQKQVELIVDTGTVAP 3364

  Fly  3500 ---------------------------------FNWFRDDRRPLPNNARTDSQILVLTNLRPEDA 3531
                                             .:|.: .|.|||...|.:...||:..:..:|:
  Rat  3365 GAPQVQVEEAELTLEAGHTATLHCSATGNPPPTIHWSK-LRAPLPWQHRIEGNTLVIPRVAQQDS 3428

  Fly  3532 GRYICN-------------------------------------------------SYDVDR-GQQ 3546
            |:||||                                                 :|...| |..
  Rat  3429 GQYICNATNSAGHTEATVVLHVESHPYATIIPEHTSVQPGKLVQLQCLAHGTPPLTYQWSRVGGI 3493

  Fly  3547 LPEVSIDL-QVLR---APQYPYNRFKGGVSLK-----------------DTPCMVLYICAAATPP 3590
            |||.::.. |:||   |.:....|::..||.|                 |.|       ..:||.
  Rat  3494 LPEKAVARNQLLRLEPAGRADSGRYRCQVSNKVGSAEAFAQVLVQGSSGDVP-------DTSTPV 3551

  Fly  3591 PNSP-IYLPPQLPAKS----------------------------------RDYSLKLD--DQSS- 3617
            .::| :.:.||...||                                  :|..|::.  |||. 
  Rat  3552 GSTPTVQVTPQQETKSIGASVEFHCAVPNEHGTHLRWLKEGGQLPPGHSVQDGVLRIQNLDQSCQ 3616

  Fly  3618 ------------------------------NLR-------AGESTDVECYSSDDTYTDVVWERSD 3645
                                          |:|       .|.|.:.||.:..|....|.|.:. 
  Rat  3617 GTYICQAHGPWGQAQATAQLIVQALPSVLINVRTSVHSVVVGHSVEFECLALGDPKPQVTWSKV- 3680

  Fly  3646 GAPLSNNVRQVGNRLVISNVSPSDAGNYVCKCKTDEGDLYTTSYKLEVEDQPHELKSSKIVYAKV 3710
            |..|.:.:.|.|:.:.|::|..:|||.|.|......|.  |.|:.|.:.....::.:...|....
  Rat  3681 GGRLRSGIVQSGSVIRIAHVELADAGQYRCAATNAAGT--TQSHVLLLVQALPQISTPPEVRVPA 3743

  Fly  3711 GANADLQCGADESRQPTYRWSRQYGQLQAGRSLMNEKLSLDSVQANDAGTYICTAQYADGETADF 3775
            |:.|...|.|.....|...||:..|.|.....|.|..|.|.||:..|||||:|||....|:...|
  Rat  3744 GSAAVFPCMASGYPTPAITWSKVDGDLPPDSRLENNMLMLPSVRPEDAGTYVCTATNRQGKVKAF 3808

  Fly  3776 PNILVVTGAIPQFRQEPRSYMSFPTLPNSSFKFNFELTFRPENGDGLLLFNGQTRGSG------- 3833
            ..:.|....:|.|.|.|.|::..||:.::..||..::||||::.||:||:|||....|       
  Rat  3809 AYLQVPERVVPYFTQTPYSFLPLPTIKDAYRKFEIKITFRPDSADGMLLYNGQKHTPGSPTNLAN 3873

  Fly  3834 ---DYIALSLKDRYAEFRFDFGGKPMLVRAEEPLALNEWHTVRVSRFKRDGYIQVDEQHPVAFPT 3895
               |:|:..|.....|||||.|.....:|...||||.::|||.:.|....|.:.|....||...:
  Rat  3874 RQPDFISFGLVGGRPEFRFDAGSGMATIRHPTPLALGQFHTVTLLRSLTQGSMIVGNLAPVNGTS 3938

  Fly  3896 LQQIPQLDLIEDLYIGGVPNWELLPADAVSQQVGFVGCISRLTLQGRTVELIREAKYKEGITDCR 3960
            ..:...|||.|:||:||.|::..:|...:|.  |||||:..|.:||..:..........||:.|.
  Rat  3939 QGKFQGLDLNEELYLGGYPDYRAIPKAGLSS--GFVGCVRELRIQGEEIVFHDVNLTTHGISHCP 4001

  Fly  3961 PCAQGPCQNKGVCLESQTEQAYTCICQPGWTGRDCA-IEGTQCTPGVCGA-GRCENTEN--DMEC 4021
            .|...||||.|.|.:|:: .:|||:|..|:||..|. .:...|.|..||. ..|.|..:  ...|
  Rat  4002 TCQDRPCQNGGQCHDSES-SSYTCVCPAGFTGSRCEHSQALHCHPEACGPDATCVNRPDGRGYNC 4065

  Fly  4022 LCPLNRSGDRCQYNEILNEHSLNFKGNSFAAYGTPKVTKVN--ITLSVRPASLE-DSVILYTAES 4083
            .|.|.|||.||:....:...|::..|:...   .|.:|..:  :.|.|....|| |.::|::...
  Rat  4066 RCHLGRSGMRCEEGVTVTTPSMSGAGSYLV---LPALTNTHHELRLDVEFKPLEPDGILLFSGGK 4127

  Fly  4084 TLPSGDYLALVLRGGHAELLINTAARLDPVVVRSAEPLPLNRWTRIEIRRRLGEGILRVGDGPER 4148
            :.|..|:::|.:.|||.|......:.|  .|:||.|||.|.||.|:...|...:|.|:|..|...
  Rat  4128 SGPVEDFVSLAMVGGHLEFRYELGSGL--AVLRSLEPLALGRWHRVSAERLNKDGSLQVDGGRPV 4190

  Fly  4149 KAKAPGSDRILSLKTHLYVGGYDRSTVKVNRDVNITKGFDGCISRLYNFQKPVNLLADIKDAANI 4213
            ...:||..:.|:|.|.||:||.:.| |:::...|::..|.||:..:....|.::|......:..:
  Rat  4191 LRSSPGKSQGLNLHTLLYLGGVEPS-VQLSPATNMSAHFRGCVGEVSVNGKRLDLTYSFLGSRGV 4254

  Fly  4214 QSC-------------GETNMIGGDEDSDNEPPVPPPTPDVHENELQPYAMAPC-ASDPCENGGS 4264
            ..|             |.|.|..|:.:      ......|..:.:|..:...|| ..:||.|||:
  Rat  4255 GQCYDSSPCERQPCRNGATCMPAGEYE------FQCLCQDGFKGDLCEHEENPCQLQEPCLNGGT 4313

  Fly  4265 CSEQEDVAVCSCPFGFSGKHCQEHLQLG-------------------FNASFRGDGYVELNRSHF 4310
            |....    |.|..||||..||:....|                   :.|.|..:|::.|..:.|
  Rat  4314 CRGTR----CLCLPGFSGPRCQQGAGYGVVESDWHPEGSGGNDAPGQYGAYFHDNGFLALPGNSF 4374

  Fly  4311 QPALEQSYTSMGIVFTTNKPNGLLFWWGQEAGEEYTGQDFIAAAVVDGYVEYSMRLDGEEAVIRN 4375
            ..:|.:...::.....|:..||||.|.| ...|....:|||:..:.||::.::.:|...||.:.:
  Rat  4375 SRSLPEVPETIEFEVRTSTANGLLLWQG-VVKESSRSKDFISLGLQDGHLVFNYQLGSGEARLVS 4438

  Fly  4376 SDIRVDNGERHIVIAKRDENTAILEVDRMLHSGE-----TRPTSKKSMKLPGNVFVGGAPDLEVF 4435
            .| .:::||.|.|.|.|:.....::||     ||     ..|....::.....:::|||||:...
  Rat  4439 ED-PINDGEWHRVTALREGQRGSIQVD-----GEELVIGRSPGPNVAVNTKDIIYIGGAPDVATL 4497

  Fly  4436 TGFRYKHNLNGCI--VVVEGETVG-----QINLSSAAVNGVNANVCPA 4476
            |..::...:.||:  :|:.....|     .::|...|..|.|...||:
  Rat  4498 TRGKFSSGITGCLKNLVLHSARPGAPPPQPLDLQHRAQAGANTRPCPS 4545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060
LDLa 704..739 CDD:238060
LDLa 813..847 CDD:238060
LDLa 852..887 CDD:238060
LDLa 902..936 CDD:238060
LDLa 956..990 CDD:238060
LDLa 997..1030 CDD:238060
LDLa 1033..1067 CDD:238060
LDLa 1072..1105 CDD:238060
LDLa 1133..1165 CDD:238060
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060 15/34 (44%)
Ig 1344..1405 CDD:472250 11/60 (18%)
Ig strand B 1355..1359 CDD:409353 0/3 (0%)
Ig strand C 1369..1372 CDD:409353 0/2 (0%)
Ig strand E 1388..1392 CDD:409353 0/3 (0%)
LDLa 1439..1473 CDD:238060 15/33 (45%)
LDLa 1479..1513 CDD:238060 17/33 (52%)
LDLa 1522..1556 CDD:238060 17/34 (50%)
Ig_Perlecan_like 1574..1649 CDD:143220 37/76 (49%)
Ig strand B 1577..1583 CDD:143220 2/5 (40%)
Ig strand C 1590..1595 CDD:143220 2/4 (50%)
Ig strand E 1613..1617 CDD:143220 3/3 (100%)
Ig strand F 1626..1632 CDD:143220 4/5 (80%)
Ig strand G 1641..1647 CDD:143220 2/5 (40%)
Laminin_B 1748..1878 CDD:459652 45/134 (34%)
EGF_Lam 1935..1989 CDD:238012 28/55 (51%)
Laminin_B 2113..2249 CDD:459652 53/139 (38%)
EGF_Lam <2250..2276 CDD:238012 12/25 (48%)
EGF_Lam 2284..2333 CDD:238012 25/48 (52%)
Laminin_EGF <2369..2399 CDD:395007 13/29 (45%)
Laminin_B 2465..2599 CDD:459652 48/143 (34%)
Ig_3 2688..2756 CDD:464046 24/70 (34%)
Ig_3 2791..2861 CDD:464046 18/254 (7%)
Ig_3 2890..2958 CDD:464046 23/93 (25%)
Ig 2987..3071 CDD:472250 28/188 (15%)
Ig strand B 3004..3008 CDD:409353 0/3 (0%)
Ig strand C 3017..3021 CDD:409353 1/3 (33%)
Ig strand E 3036..3040 CDD:409353 2/25 (8%)
Ig strand F 3050..3055 CDD:409353 2/4 (50%)
Ig strand G 3063..3066 CDD:409353 0/2 (0%)
I-set 3089..3162 CDD:400151 23/73 (32%)
Ig strand B 3094..3098 CDD:409353 1/3 (33%)
Ig strand C 3107..3111 CDD:409353 1/3 (33%)
Ig strand E 3128..3132 CDD:409353 1/4 (25%)
Ig strand F 3142..3147 CDD:409353 2/4 (50%)
Ig strand G 3155..3158 CDD:409353 0/2 (0%)
Ig 3165..3253 CDD:472250 28/90 (31%)
Ig strand B 3185..3189 CDD:409353 2/3 (67%)
Ig strand C 3198..3202 CDD:409353 1/3 (33%)
Ig strand E 3219..3223 CDD:409353 2/6 (33%)
Ig strand F 3233..3238 CDD:409353 2/4 (50%)
Ig strand G 3246..3249 CDD:409353 2/2 (100%)
Ig 3298..3355 CDD:472250 17/113 (15%)
Ig strand B 3301..3305 CDD:409353 1/3 (33%)
Ig strand C 3313..3316 CDD:409353 0/2 (0%)
Ig strand E 3333..3336 CDD:409353 1/2 (50%)
IG_like 3381..3457 CDD:214653 24/78 (31%)
Ig strand B 3390..3394 CDD:409353 0/3 (0%)
Ig strand C 3403..3407 CDD:409353 0/3 (0%)
Ig strand F 3437..3442 CDD:409353 3/4 (75%)
IG_like 3475..>3536 CDD:214653 20/152 (13%)
Ig strand B 3480..3484 CDD:409353 2/3 (67%)
Ig strand C 3491..3503 CDD:409353 5/83 (6%)
Ig strand E 3519..3523 CDD:409353 1/3 (33%)
Ig 3613..3675 CDD:472250 22/101 (22%)
Ig strand B 3625..3629 CDD:409353 0/3 (0%)
Ig strand C 3637..3642 CDD:409353 1/4 (25%)
Ig strand E 3658..3662 CDD:409353 0/3 (0%)
IG_like 3706..3772 CDD:214653 25/65 (38%)
Ig strand B 3714..3718 CDD:409353 1/3 (33%)
Ig strand C 3727..3731 CDD:409353 0/3 (0%)
Ig strand E 3746..3750 CDD:409353 1/3 (33%)
Ig strand F 3760..3765 CDD:409353 3/4 (75%)
Ig strand G 3774..3777 CDD:409353 1/2 (50%)
LamG 3794..3939 CDD:238058 56/154 (36%)
EGF 3962..3994 CDD:394967 15/31 (48%)
LamG 4042..4195 CDD:238058 48/155 (31%)
EGF_CA 4254..4286 CDD:238011 13/32 (41%)
LamG 4295..4448 CDD:238058 41/157 (26%)
Hspg2XP_038967229.1 SEA 80..194 CDD:470595
LDLa 216..251 CDD:238060 15/34 (44%)
LDLa 301..332 CDD:197566 13/30 (43%)
LDLa 346..375 CDD:238060 14/28 (50%)
LDLa 384..419 CDD:238060 17/34 (50%)
Ig_Perlecan_like 437..514 CDD:143220 37/76 (49%)
Ig strand B 440..446 CDD:143220 2/5 (40%)
Ig strand C 453..458 CDD:143220 2/4 (50%)
Ig strand E 478..482 CDD:143220 3/3 (100%)
Ig strand F 491..497 CDD:143220 4/5 (80%)
Ig strand G 506..512 CDD:143220 2/5 (40%)
LamB 606..732 CDD:214597 43/154 (28%)
EGF_Lam 780..822 CDD:238012 9/42 (21%)
EGF_Lam 829..886 CDD:238012 28/56 (50%)
Laminin_EGF 895..937 CDD:395007 14/42 (33%)
Laminin_B 1006..1140 CDD:459652 53/139 (38%)
EGF_Lam 1174..1223 CDD:238012 25/48 (52%)
EGF_Lam 1224..1280 CDD:238012 5/55 (9%)
Laminin_EGF 1291..1338 CDD:395007 17/47 (36%)
Laminin_B 1555..1687 CDD:459652 48/143 (34%)
EGF_Lam 1722..1770 CDD:238012 0/47 (0%)
EGF_Lam 1771..1828 CDD:238012 14/56 (25%)
IG_like 1841..1921 CDD:214653 27/82 (33%)
Ig strand B 1852..1856 CDD:409353 1/3 (33%)
Ig strand C 1865..1870 CDD:409353 1/4 (25%)
Ig strand E 1887..1891 CDD:409353 1/3 (33%)
Ig strand F 1901..1906 CDD:409353 4/4 (100%)
Ig strand G 1914..1917 CDD:409353 1/2 (50%)
IgI_Perlecan_like 1929..2014 CDD:409412 3/84 (4%)
Ig strand A 1929..1933 CDD:409412 0/3 (0%)
Ig strand A' 1938..1941 CDD:409412 0/2 (0%)
Ig strand B 1945..1955 CDD:409412 0/9 (0%)
Ig strand C 1961..1965 CDD:409412 0/3 (0%)
Ig strand C' 1968..1970 CDD:409412 0/1 (0%)
Ig strand D 1975..1980 CDD:409412 0/4 (0%)
Ig strand E 1981..1987 CDD:409412 0/5 (0%)
Ig strand F 1994..2002 CDD:409412 0/7 (0%)
Ig strand G 2005..2014 CDD:409412 2/8 (25%)
Ig 2024..2108 CDD:472250 8/83 (10%)
Ig strand B 2041..2045 CDD:409570 1/3 (33%)
Ig strand C 2054..2058 CDD:409570 0/3 (0%)
Ig strand E 2074..2078 CDD:409570 0/3 (0%)
Ig strand F 2088..2093 CDD:409570 0/4 (0%)
Ig strand G 2101..2104 CDD:409570 0/2 (0%)
I-set 2114..2200 CDD:400151 4/85 (5%)
Ig strand B 2131..2135 CDD:409353 0/3 (0%)
Ig strand C 2144..2148 CDD:409353 1/3 (33%)
Ig strand E 2166..2170 CDD:409353 0/3 (0%)
Ig strand F 2180..2185 CDD:409353 0/4 (0%)
IG_like 2215..2292 CDD:214653 10/76 (13%)
Ig strand B 2226..2230 CDD:409353 0/3 (0%)
Ig strand C 2239..2243 CDD:409353 0/3 (0%)
Ig strand E 2259..2262 CDD:409353 2/2 (100%)
Ig strand F 2272..2277 CDD:409353 2/4 (50%)
Ig strand G 2285..2288 CDD:409353 1/2 (50%)
IG_like 2316..2389 CDD:214653 3/72 (4%)
Ig strand B 2327..2331 CDD:409353 0/3 (0%)
Ig strand C 2338..2342 CDD:409353 0/3 (0%)
Ig strand F 2371..2376 CDD:409353 1/4 (25%)
Ig strand G 2382..2385 CDD:409353 0/2 (0%)
Ig 2404..2484 CDD:472250 23/83 (28%)
Ig strand C 2434..2438 CDD:409353 0/3 (0%)
Ig strand E 2453..2457 CDD:409353 1/3 (33%)
Ig strand F 2467..2472 CDD:409353 2/4 (50%)
Ig strand G 2481..2484 CDD:409353 0/2 (0%)
IG_like 2506..2581 CDD:214653 3/74 (4%)
Ig strand C 2530..2534 CDD:409353 0/3 (0%)
Ig strand E 2549..2553 CDD:409353 0/3 (0%)
Ig strand F 2563..2568 CDD:409353 0/4 (0%)
IG_like 2602..2679 CDD:214653 13/78 (17%)
Ig strand B 2613..2617 CDD:409353 0/3 (0%)
Ig strand C 2626..2630 CDD:409353 1/3 (33%)
Ig strand E 2645..2649 CDD:409353 0/3 (0%)
Ig strand G 2670..2673 CDD:409353 0/2 (0%)
IG_like 2707..2776 CDD:214653 12/68 (18%)
Ig strand B 2710..2714 CDD:409353 0/3 (0%)
Ig strand C 2722..2727 CDD:409353 0/4 (0%)
Ig strand E 2743..2746 CDD:409353 1/2 (50%)
Ig strand F 2756..2761 CDD:409353 2/4 (50%)
Ig strand G 2769..2772 CDD:409353 0/2 (0%)
IG_like 2796..2872 CDD:214653 24/78 (31%)
Ig strand C 2819..2823 CDD:409353 1/3 (33%)
Ig strand E 2838..2842 CDD:409353 0/3 (0%)
Ig strand F 2852..2857 CDD:409353 2/4 (50%)
IG_like 2892..2969 CDD:214653 26/81 (32%)
Ig strand C 2916..2920 CDD:409353 2/8 (25%)
Ig strand E 2935..2939 CDD:409353 1/3 (33%)
Ig strand F 2949..2954 CDD:409353 2/4 (50%)
IG_like 2994..3066 CDD:214653 8/71 (11%)
Ig strand B 3000..3004 CDD:409353 0/3 (0%)
Ig strand C 3013..3017 CDD:409353 0/3 (0%)
Ig strand E 3032..3036 CDD:409353 0/3 (0%)
Ig strand F 3046..3051 CDD:409353 0/4 (0%)
Ig strand G 3059..3062 CDD:409353 0/2 (0%)
IG_like 3087..3165 CDD:214653 13/78 (17%)
Ig strand B 3098..3102 CDD:409353 1/3 (33%)
Ig strand C 3111..3115 CDD:409353 0/3 (0%)
Ig strand E 3130..3134 CDD:409353 1/3 (33%)
Ig strand F 3144..3149 CDD:409353 2/4 (50%)
Ig strand G 3158..3161 CDD:409353 0/2 (0%)
Ig 3178..3264 CDD:472250 27/93 (29%)
Ig strand B 3195..3199 CDD:409353 0/3 (0%)
Ig strand C 3208..3213 CDD:409353 0/4 (0%)
Ig strand E 3230..3234 CDD:409353 1/3 (33%)
Ig strand F 3244..3249 CDD:409353 3/4 (75%)
Ig strand G 3257..3260 CDD:409353 0/2 (0%)
IG_like 3276..3357 CDD:214653 10/82 (12%)
Ig strand B 3286..3290 CDD:409568 2/3 (67%)
Ig strand C 3299..3303 CDD:409568 0/3 (0%)
Ig strand E 3323..3327 CDD:409568 0/3 (0%)
Ig strand F 3337..3342 CDD:409568 0/4 (0%)
Ig strand G 3350..3353 CDD:409568 1/2 (50%)
IG_like 3376..3450 CDD:214653 14/74 (19%)
Ig strand B 3384..3388 CDD:409570 0/3 (0%)
Ig strand C 3397..3401 CDD:409570 0/3 (0%)
Ig strand E 3416..3420 CDD:409570 1/3 (33%)
Ig strand F 3430..3435 CDD:409570 3/4 (75%)
Ig strand G 3443..3446 CDD:409570 0/2 (0%)
Ig 3454..3537 CDD:472250 14/82 (17%)
Ig strand B 3471..3475 CDD:409353 0/3 (0%)
Ig strand C 3484..3488 CDD:409353 1/3 (33%)
Ig strand F 3517..3522 CDD:409353 1/4 (25%)
Ig 3560..3638 CDD:472250 9/77 (12%)
Ig strand B 3572..3576 CDD:409353 0/3 (0%)
Ig strand C 3585..3589 CDD:409353 0/3 (0%)
Ig strand E 3604..3608 CDD:409353 1/3 (33%)
Ig strand F 3618..3623 CDD:409353 0/4 (0%)
Ig strand G 3631..3634 CDD:409353 0/2 (0%)
Ig 3662..3722 CDD:409353 18/62 (29%)
Ig strand B 3662..3665 CDD:409353 0/2 (0%)
Ig strand C 3674..3678 CDD:409353 1/3 (33%)
Ig strand E 3693..3697 CDD:409353 0/3 (0%)
Ig strand F 3707..3712 CDD:409353 2/4 (50%)
I-set 3731..3813 CDD:400151 26/81 (32%)
Ig strand B 3747..3751 CDD:409353 1/3 (33%)
Ig strand C 3760..3764 CDD:409353 0/3 (0%)
Ig strand E 3779..3783 CDD:409353 1/3 (33%)
Ig strand F 3793..3798 CDD:409353 3/4 (75%)
Ig strand G 3806..3809 CDD:409353 0/2 (0%)
LamG 3820..3980 CDD:238058 59/161 (37%)
EGF_CA 4003..4036 CDD:238011 15/33 (45%)
LamG 4089..4238 CDD:238058 47/154 (31%)
EGF 4263..4293 CDD:394967 5/35 (14%)
EGF_CA 4300..4331 CDD:238011 14/34 (41%)
LamG 4358..4516 CDD:238058 43/164 (26%)
Blue background indicates that the domain is not in the aligned region.

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