| Sequence 1: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001094110.1 | Gene: | Lamc2 / 192362 | RGDID: | 621053 | Length: | 1192 | Species: | Rattus norvegicus |
| Alignment Length: | 840 | Identity: | 223/840 - (26%) |
|---|---|---|---|
| Similarity: | 329/840 - (39%) | Gaps: | 212/840 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1879 KC-QCPPGYVGDSCESCASGYVRQPGGPWLGHCVPFIPDSCPSGTYGDPRRGVPCKECPCPLTGS 1942
Fly 1943 NNFASGCQQSPDGDVVCRCNEGYTGRRCEQCAAGYQGNPLAAGGICR--RIPDTSCNVD--GTYS 2003
Fly 2004 VHSNGTCQCKDSVIGEQCDTCKSKSFHLNSFTYTGCIECFCSGVGLDCDSSTWYR-DQVTSTFGR 2067
Fly 2068 SRVDHGFVLVTNYMQPTPDTVPVSMAAEPNALSFIGSADQSGNTLYWSLPAAFLGNKLSSYGGKL 2132
Fly 2133 TYTLSYSPLPNGIMSRNSAPDVVIK-SGEDLRLIHYRKSQVVP-SVANTYSVEIKE---SAWQRG 2192
Fly 2193 DEVVANREHVLMALSDITAIYIKATY-TTSTKEASLRQVTLDVATPTNLGTPRAVEVEQCRCPEG 2256
Fly 2257 YLGLSCEQCAPGYARDPEGGIYLGLCRPCECNGHSKYCNSDTGDCE--------ECSD------- 2306
Fly 2307 -----------------------NTE------------GPSCERCAAGYVGD--ATRGTIYDCQP 2334
Fly 2335 DEGYPIPSPPAPGNQTLECTAYC-QIEGIYDCRGNECL-CKRNVIGDQCDQCRPGTYG--LSAQN 2395
Fly 2396 QDGCKECYCSGLAS---QCRS------------------AAL-----------------YRQLIP 2422
Fly 2423 VDFIL------NAPLITDE-SGAVQDTENLIPDISRNMYTYTHTSYLPKYWSLRGSVLGNQLFSY 2480
Fly 2481 GGRL-SYSLIVE-------SYGNYERGHDIVLIGNGLKLIWSRPDGNENQEEYNVRLHEDEQWTR 2537
Fly 2538 QD--RESARPASR-SDFMTVLSDLQHILIRATPRVPTQSTSI---------GNVILESAV 2585 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
| LDLa | 532..564 | CDD:238060 | |||
| LDLa | 571..606 | CDD:238060 | |||
| LDLa | 616..650 | CDD:238060 | |||
| LDLa | 704..739 | CDD:238060 | |||
| LDLa | 813..847 | CDD:238060 | |||
| LDLa | 852..887 | CDD:238060 | |||
| LDLa | 902..936 | CDD:238060 | |||
| LDLa | 956..990 | CDD:238060 | |||
| LDLa | 997..1030 | CDD:238060 | |||
| LDLa | 1033..1067 | CDD:238060 | |||
| LDLa | 1072..1105 | CDD:238060 | |||
| LDLa | 1133..1165 | CDD:238060 | |||
| LDLa | 1182..1215 | CDD:238060 | |||
| LDLa | 1221..1251 | CDD:238060 | |||
| LDLa | 1252..1286 | CDD:238060 | |||
| LDLa | 1292..1326 | CDD:238060 | |||
| IG | 1344..1421 | CDD:214652 | |||
| Ig | 1344..1405 | CDD:299845 | |||
| LDLa | 1439..1473 | CDD:238060 | |||
| LDLa | 1479..1513 | CDD:238060 | |||
| LDLa | 1522..1556 | CDD:238060 | |||
| IG_like | 1566..1649 | CDD:214653 | |||
| Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | |||
| Laminin_B | 1748..1864 | CDD:278481 | |||
| EGF_Lam | 1935..1989 | CDD:238012 | 17/53 (32%) | ||
| Laminin_B | 2113..2238 | CDD:278481 | 39/130 (30%) | ||
| EGF_Lam | <2250..2276 | CDD:238012 | 13/25 (52%) | ||
| EGF_Lam | 2284..2333 | CDD:238012 | 25/100 (25%) | ||
| Laminin_EGF | <2369..2399 | CDD:278482 | 13/32 (41%) | ||
| Laminin_B | 2465..2587 | CDD:278481 | 29/141 (21%) | ||
| I-set | 2686..2772 | CDD:254352 | |||
| Ig_2 | 2689..2771 | CDD:290606 | |||
| Ig | 2779..2865 | CDD:299845 | |||
| IG_like | 2798..2864 | CDD:214653 | |||
| Ig | 2882..2965 | CDD:299845 | |||
| IG_like | 2882..2950 | CDD:214653 | |||
| Ig | 2977..3061 | CDD:299845 | |||
| IG_like | 2984..3058 | CDD:214653 | |||
| IG_like | 3074..3152 | CDD:214653 | |||
| Ig | 3086..3153 | CDD:299845 | |||
| I-set | 3155..3243 | CDD:254352 | |||
| IGc2 | 3171..3233 | CDD:197706 | |||
| IG | 3371..3447 | CDD:214652 | |||
| IGc2 | 3377..3437 | CDD:197706 | |||
| Ig | 3456..3534 | CDD:299845 | |||
| IG | 3465..>3526 | CDD:214652 | |||
| Ig | 3603..3665 | CDD:299845 | |||
| IG | 3610..3683 | CDD:214652 | |||
| IG | 3696..3762 | CDD:214652 | |||
| Ig | 3704..3771 | CDD:299845 | |||
| LamG | 3784..3929 | CDD:238058 | |||
| EGF | 3952..3984 | CDD:278437 | |||
| LamG | 4032..4185 | CDD:238058 | |||
| Laminin_G_2 | 4315..4444 | CDD:280389 | |||
| Lamc2 | NP_001094110.1 | Laminin_EGF | 28..>74 | CDD:278482 | 7/21 (33%) |
| EGF_Lam | 83..127 | CDD:238012 | 18/54 (33%) | ||
| Laminin_EGF | 139..184 | CDD:278482 | 15/44 (34%) | ||
| LamB | 245..370 | CDD:214597 | 40/135 (30%) | ||
| TNFRSF | <437..>501 | CDD:304602 | 11/63 (17%) | ||
| CRD2 | 445..481 | CDD:276900 | 2/35 (6%) | ||
| Laminin_EGF | 517..564 | CDD:278482 | 19/61 (31%) | ||
| EGF_Lam | 572..>602 | CDD:238012 | 6/29 (21%) | ||
| Tar | 769..1165 | CDD:223910 | 9/44 (20%) | ||
| V_Alix_like | <1039..>1159 | CDD:187408 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||