DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trol and egg-2

DIOPT Version :10

Sequence 1:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster
Sequence 2:NP_498537.1 Gene:egg-2 / 187510 WormBaseID:WBGene00019811 Length:548 Species:Caenorhabditis elegans


Alignment Length:611 Identity:151/611 - (24%)
Similarity:226/611 - (36%) Gaps:227/611 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 AACSGMEYQCRDG-TRCISVSQQCDGHSDCSDGDDEEHCDGSGYDSEECRFDEFHC--------- 623
            :.|||..:.|... ...|..|::|||..|||||.|||:|       :||: ..:.|         
 Worm   121 STCSGFGFACTGSIDMIIPSSKRCDGLKDCSDGSDEENC-------KECQ-SIYSCRAHIEEESE 177

  Fly   624 --------GTGECIPMRQVCDNIYDCNDYSDEVNCVEGEEEDRVGIPIGHQPWRPASKHDDWLHE 680
                    .|..|:...::|:.:.:|.|.|||.:|                              
 Worm   178 KKDKTSVLPTLICLTAEKLCNGVENCPDGSDEASC------------------------------ 212

  Fly   681 MDTSEYQVYQPSNVYEKANSQNPCASNQFRCTTSNVCIPLHLRCDGFYHCNDMSDEKSCEQYQRH 745
                                ::.|:.:||:|:.|:.|:|:.::|||...|.:.|||.:|.:.|: 
 Worm   213 --------------------RSKCSKDQFKCSGSDACLPISVKCDGVSDCENESDESNCNKCQK- 256

  Fly   746 TTTRRPLTLATPTSRITTQGPGLLERRNTTTATEASRWPWATKTTTIATTTSNPITTVGVANSPP 810
                                                                             
 Worm   257 ----------------------------------------------------------------- 256

  Fly   811 QTCLENIEFACH--NRDCISIESVCDGIPDCGRNEDEDDALCK-CSGDKYKCQRGGGCIPKSQVC 872
                     ..|  .::||....||||||||....||....|| |||.:......|.||.:||||
 Worm   257 ---------GAHKCGKNCIKASKVCDGIPDCDDGSDEHQCDCKTCSGSEKALCEDGTCIMRSQVC 312

  Fly   873 DGKPQCHDRSDESACHLHGRLNKTRLGVKCLESQYQCGDGSCISGYKRCNGIHDCADASDEYNCI 937
            |||..|.|..||..|  .|..:..|...|.  ....|.||:..|..:.|:|:.:..    |.|| 
 Worm   313 DGKHDCLDGIDEENC--PGSCSNERFSSKL--KLLTCDDGNQYSEVEACSGLVEAC----ELNC- 368

  Fly   938 YDYEDTYDTDPNNNPLNECDILEFECD-----YSQCLPLEKKCDGYADCEDMSDELECQSYTDHC 997
                      |..:|.:     .|.|.     :::|:...|.|||..||||.:||.:|....:..
 Worm   369 ----------PKCDPKH-----TFTCPAVGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKECV 418

  Fly   998 LES--EFECDSYCLPRDQLCNGIPNCQDGSDERNCTFCREDAYLCNTG-ECVADNQRCNGIADCA 1059
            :||  :|.||:.||...:.|:|:.:|:|.|||:.|..|...::.|:.. :|:..:.||||:|:|:
 Worm   419 VESSIQFTCDNKCLESSRRCDGVWDCEDKSDEKGCDKCPSRSFKCSADKKCLPFHTRCNGVAECS 483

  Fly  1060 DGSDERHCARIYCPPNKLACNGTCVSRRIKCDGIRDCLDGYDEMY-CPETNNHYPTQNVNVIRPK 1123
            |||||..|:                     |   ::||..:.:.| |.|:|.......|      
 Worm   484 DGSDEHKCS---------------------C---QECLGTHHDTYMCSESNRCLKRGEV------ 518

  Fly  1124 LGPNPIPKSCRPHEWQCANLECIDSS 1149
                     |.|:. .|.|...||.:
 Worm   519 ---------CSPYS-MCPNATYIDKA 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060 17/35 (49%)
LDLa 616..650 CDD:238060 10/50 (20%)
LDLa 704..739 CDD:238060 14/34 (41%)
LDLa 813..847 CDD:238060 13/35 (37%)
LDLa 852..887 CDD:238060 17/34 (50%)
LDLa 902..936 CDD:238060 7/33 (21%)
LDLa 956..990 CDD:238060 13/38 (34%)
LDLa 997..1030 CDD:238060 14/34 (41%)
LDLa 1033..1067 CDD:238060 14/34 (41%)
LDLa 1072..1105 CDD:238060 4/33 (12%)
LDLa 1133..1165 CDD:238060 6/17 (35%)
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060
Ig 1344..1405 CDD:472250
Ig strand B 1355..1359 CDD:409353
Ig strand C 1369..1372 CDD:409353
Ig strand E 1388..1392 CDD:409353
LDLa 1439..1473 CDD:238060
LDLa 1479..1513 CDD:238060
LDLa 1522..1556 CDD:238060
Ig_Perlecan_like 1574..1649 CDD:143220
Ig strand B 1577..1583 CDD:143220
Ig strand C 1590..1595 CDD:143220
Ig strand E 1613..1617 CDD:143220
Ig strand F 1626..1632 CDD:143220
Ig strand G 1641..1647 CDD:143220
Laminin_B 1748..1878 CDD:459652
EGF_Lam 1935..1989 CDD:238012
Laminin_B 2113..2249 CDD:459652
EGF_Lam <2250..2276 CDD:238012
EGF_Lam 2284..2333 CDD:238012
Laminin_EGF <2369..2399 CDD:395007
Laminin_B 2465..2599 CDD:459652
Ig_3 2688..2756 CDD:464046
Ig_3 2791..2861 CDD:464046
Ig_3 2890..2958 CDD:464046
Ig 2987..3071 CDD:472250
Ig strand B 3004..3008 CDD:409353
Ig strand C 3017..3021 CDD:409353
Ig strand E 3036..3040 CDD:409353
Ig strand F 3050..3055 CDD:409353
Ig strand G 3063..3066 CDD:409353
I-set 3089..3162 CDD:400151
Ig strand B 3094..3098 CDD:409353
Ig strand C 3107..3111 CDD:409353
Ig strand E 3128..3132 CDD:409353
Ig strand F 3142..3147 CDD:409353
Ig strand G 3155..3158 CDD:409353
Ig 3165..3253 CDD:472250
Ig strand B 3185..3189 CDD:409353
Ig strand C 3198..3202 CDD:409353
Ig strand E 3219..3223 CDD:409353
Ig strand F 3233..3238 CDD:409353
Ig strand G 3246..3249 CDD:409353
Ig 3298..3355 CDD:472250
Ig strand B 3301..3305 CDD:409353
Ig strand C 3313..3316 CDD:409353
Ig strand E 3333..3336 CDD:409353
IG_like 3381..3457 CDD:214653
Ig strand B 3390..3394 CDD:409353
Ig strand C 3403..3407 CDD:409353
Ig strand F 3437..3442 CDD:409353
IG_like 3475..>3536 CDD:214653
Ig strand B 3480..3484 CDD:409353
Ig strand C 3491..3503 CDD:409353
Ig strand E 3519..3523 CDD:409353
Ig 3613..3675 CDD:472250
Ig strand B 3625..3629 CDD:409353
Ig strand C 3637..3642 CDD:409353
Ig strand E 3658..3662 CDD:409353
IG_like 3706..3772 CDD:214653
Ig strand B 3714..3718 CDD:409353
Ig strand C 3727..3731 CDD:409353
Ig strand E 3746..3750 CDD:409353
Ig strand F 3760..3765 CDD:409353
Ig strand G 3774..3777 CDD:409353
LamG 3794..3939 CDD:238058
EGF 3962..3994 CDD:394967
LamG 4042..4195 CDD:238058
EGF_CA 4254..4286 CDD:238011
LamG 4295..4448 CDD:238058
egg-2NP_498537.1 LDLa 123..159 CDD:238060 17/35 (49%)
LDLa 216..251 CDD:238060 14/34 (41%)
LDLa 254..287 CDD:238060 14/107 (13%)
LDLa 300..327 CDD:238060 14/26 (54%)
LDLa 373..411 CDD:238060 14/42 (33%)
LDLa 424..453 CDD:238060 12/28 (43%)
LDLa 456..491 CDD:238060 14/34 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.