DRSC/TRiP Functional Genomics Resources

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Protein Alignment trol and egg-1

DIOPT Version :10

Sequence 1:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster
Sequence 2:NP_498237.2 Gene:egg-1 / 175804 WormBaseID:WBGene00015083 Length:551 Species:Caenorhabditis elegans


Alignment Length:584 Identity:152/584 - (26%)
Similarity:205/584 - (35%) Gaps:243/584 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 AACSGMEYQCRDGTR-CISVSQQCDGHSDCSDGDDEEHCDGSGYDSEECRFDEFHC--------- 623
            :.|||..:.|..... .|..|::|||..||.||.|||:|       :||: ..|.|         
 Worm   121 STCSGFGFACTGAVHMVIPSSKRCDGRRDCEDGSDEENC-------KECQ-SVFSCKLRPEEESK 177

  Fly   624 --------GTGECIPMRQVCDNIYDCNDYSDEVNCVEGEEEDRVGIPIGHQPWRPASKHDDWLHE 680
                    .|..|:..:.:|||:.:|.|.|||..|                              
 Worm   178 KKGRSTVQPTLICLTAQHLCDNVENCPDGSDEAVC------------------------------ 212

  Fly   681 MDTSEYQVYQPSNVYEKANSQNPCASNQFRCTTSNVCIPLHLRCDGFYHCNDMSDEKSCEQYQRH 745
                                ::.|:.:||:|..||.|:||..:|||...|.|.||||:|.:.|  
 Worm   213 --------------------KSSCSKDQFKCPGSNACLPLSAKCDGINDCADASDEKNCSKCQ-- 255

  Fly   746 TTTRRPLTLATPTSRITTQGPGLLERRNTTTATEASRWPWATKTTTIATTTSNPITTVGVANSPP 810
                                                                             
 Worm   256 ----------------------------------------------------------------- 255

  Fly   811 QTCLENIEFACHNRDCISIESVCDGIPDCGRNEDEDDALC-KCSG-DKYKCQRGGGCIPKSQVCD 873
                 |....| .:.||....||||:..|....||....| :||| ||..|. .|.||.::||||
 Worm   256 -----NNAHKC-GKQCIKASHVCDGVAQCADGSDEQQCDCQRCSGTDKALCD-DGTCIMRTQVCD 313

  Fly   874 GKPQCHDRSDESACHLHGRLNKTRLGVKCLES------QYQCGDGS------------------- 913
            ||..|.|..||..|.          |...:||      ...|.||.                   
 Worm   314 GKKDCTDGMDEEDCP----------GSCTIESFSPKLKMVTCSDGKQYTEAEACSGSFESCDHDC 368

  Fly   914 ----------------------CISGYKRCNGIHDCADASDEYNCIYDYEDTYDTDPNNNPLNEC 956
                                  |||..|.|:|..||.|.:||.||              .|:.||
 Worm   369 PNSKCHPKLAFTCPASKEARKMCISRRKVCDGTPDCDDGADEINC--------------TPIKEC 419

  Fly   957 DI---LEFECDYSQCLPLEKKCDGYADCEDMSDELECQSYTDHCLESEFEC--DSYCLPRDQLCN 1016
            .|   .:|:||: :||...::|||..||||.|||..|    |.|.....:|  |..|||....||
 Worm   420 GIAKNTQFKCDH-KCLDSSRRCDGVWDCEDKSDEKGC----DKCPSGTIKCAADKKCLPAFTRCN 479

  Fly  1017 GIPNCQDGSDERNCTFCRE------DAYLCN-TGECVADNQRCNGIADC--ADGSDERHCARIY 1071
            |:.:|.|||||..|: |:|      :.|:|| :..|:..::.|:..:.|  |..:|:..||.::
 Worm   480 GVADCSDGSDELKCS-CQECLGVHSNTYMCNESNRCLKRDEVCSPYSMCPNATYTDKAFCAALF 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060 16/35 (46%)
LDLa 616..650 CDD:238060 13/50 (26%)
LDLa 704..739 CDD:238060 18/34 (53%)
LDLa 813..847 CDD:238060 11/33 (33%)
LDLa 852..887 CDD:238060 19/35 (54%)
LDLa 902..936 CDD:238060 16/80 (20%)
LDLa 956..990 CDD:238060 17/36 (47%)
LDLa 997..1030 CDD:238060 15/34 (44%)
LDLa 1033..1067 CDD:238060 10/42 (24%)
LDLa 1072..1105 CDD:238060 152/584 (26%)
LDLa 1133..1165 CDD:238060
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060
Ig 1344..1405 CDD:472250
Ig strand B 1355..1359 CDD:409353
Ig strand C 1369..1372 CDD:409353
Ig strand E 1388..1392 CDD:409353
LDLa 1439..1473 CDD:238060
LDLa 1479..1513 CDD:238060
LDLa 1522..1556 CDD:238060
Ig_Perlecan_like 1574..1649 CDD:143220
Ig strand B 1577..1583 CDD:143220
Ig strand C 1590..1595 CDD:143220
Ig strand E 1613..1617 CDD:143220
Ig strand F 1626..1632 CDD:143220
Ig strand G 1641..1647 CDD:143220
Laminin_B 1748..1878 CDD:459652
EGF_Lam 1935..1989 CDD:238012
Laminin_B 2113..2249 CDD:459652
EGF_Lam <2250..2276 CDD:238012
EGF_Lam 2284..2333 CDD:238012
Laminin_EGF <2369..2399 CDD:395007
Laminin_B 2465..2599 CDD:459652
Ig_3 2688..2756 CDD:464046
Ig_3 2791..2861 CDD:464046
Ig_3 2890..2958 CDD:464046
Ig 2987..3071 CDD:472250
Ig strand B 3004..3008 CDD:409353
Ig strand C 3017..3021 CDD:409353
Ig strand E 3036..3040 CDD:409353
Ig strand F 3050..3055 CDD:409353
Ig strand G 3063..3066 CDD:409353
I-set 3089..3162 CDD:400151
Ig strand B 3094..3098 CDD:409353
Ig strand C 3107..3111 CDD:409353
Ig strand E 3128..3132 CDD:409353
Ig strand F 3142..3147 CDD:409353
Ig strand G 3155..3158 CDD:409353
Ig 3165..3253 CDD:472250
Ig strand B 3185..3189 CDD:409353
Ig strand C 3198..3202 CDD:409353
Ig strand E 3219..3223 CDD:409353
Ig strand F 3233..3238 CDD:409353
Ig strand G 3246..3249 CDD:409353
Ig 3298..3355 CDD:472250
Ig strand B 3301..3305 CDD:409353
Ig strand C 3313..3316 CDD:409353
Ig strand E 3333..3336 CDD:409353
IG_like 3381..3457 CDD:214653
Ig strand B 3390..3394 CDD:409353
Ig strand C 3403..3407 CDD:409353
Ig strand F 3437..3442 CDD:409353
IG_like 3475..>3536 CDD:214653
Ig strand B 3480..3484 CDD:409353
Ig strand C 3491..3503 CDD:409353
Ig strand E 3519..3523 CDD:409353
Ig 3613..3675 CDD:472250
Ig strand B 3625..3629 CDD:409353
Ig strand C 3637..3642 CDD:409353
Ig strand E 3658..3662 CDD:409353
IG_like 3706..3772 CDD:214653
Ig strand B 3714..3718 CDD:409353
Ig strand C 3727..3731 CDD:409353
Ig strand E 3746..3750 CDD:409353
Ig strand F 3760..3765 CDD:409353
Ig strand G 3774..3777 CDD:409353
LamG 3794..3939 CDD:238058
EGF 3962..3994 CDD:394967
LamG 4042..4195 CDD:238058
EGF_CA 4254..4286 CDD:238011
LamG 4295..4448 CDD:238058
egg-1NP_498237.2 LDLa 123..159 CDD:238060 16/35 (46%)
LDLa 216..251 CDD:238060 18/34 (53%)
LDLa 254..287 CDD:238060 12/105 (11%)
LDLa 300..327 CDD:238060 14/27 (52%)
LDLa <391..413 CDD:238060 11/21 (52%)
LDLa 425..455 CDD:238060 15/30 (50%)
LDLa 458..493 CDD:238060 15/34 (44%)
Blue background indicates that the domain is not in the aligned region.

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