DRSC/TRiP Functional Genomics Resources

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Protein Alignment trol and Lama5

DIOPT Version :10

Sequence 1:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster
Sequence 2:NP_001178538.1 Gene:Lama5 / 140433 RGDID:621023 Length:3713 Species:Rattus norvegicus


Alignment Length:4514 Identity:896/4514 - (19%)
Similarity:1382/4514 - (30%) Gaps:1602/4514 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   633 QVCDNIYDCNDYSDEV----NCVEGEEEDRVGIPIGHQP-----------------------WRP 670
            |.||.....|  |::.    |.::|.|......|:...|                       :..
  Rat   105 QYCDICIAAN--SNKAHPVSNAIDGTERWWQSPPLSRGPEYNEVNVTLDLGQVFHVAYVLIKFAN 167

  Fly   671 ASKHDDWLHEMDTSEYQVYQPSNVYEKANSQNPCASNQFRCTTSNVCIPLHLRCDGFYHCNDMSD 735
            :.:.|.|:.|..|.....|||...:  |:|:..|.......|...:               ...|
  Rat   168 SPRPDLWVLERSTDFGHTYQPWQFF--ASSKRDCLERFGPRTLERI---------------TQDD 215

  Fly   736 EKSC-EQYQRHTTTRR-----PLTLATPTSRITTQGPGLLERRNTTTATEASRWPWATKTTTIAT 794
            :..| .:|.|......     .|....|.:|..:..|.|   |:.|.||.. |..:....|.:. 
  Rat   216 DVICTTEYSRIVPLENGEIVVSLVNGRPGARNFSYSPVL---RDFTKATNI-RLRFLRTNTLLG- 275

  Fly   795 TTSNPITTVGVANSPPQTCLENIEFACHNRDCISI--ESVCDGIPD-CGRNEDEDDALCKCSGDK 856
                  ..:|.|...| |......::..:   |||  ..||.|..| |...:..|....:|:...
  Rat   276 ------HLMGKALRDP-TVTRRYYYSIKD---ISIGGRCVCHGHADVCDAKDPSDPFRLQCACQH 330

  Fly   857 YKCQRGGGCIPKSQVCDG------KPQCHDRSDE-SACHLHG------------RLNKTRLGVKC 902
            ..|  ||.|   .:.|.|      ||...|.::| .:|:.||            |.|.:    :.
  Rat   331 NTC--GGSC---DRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRRNAS----QN 386

  Fly   903 LESQYQCGDGSCISGYKRCNGIHDCADASDEYNC------IYDYEDTYDTDPNNNPLNECDILEF 961
            |::.|| |.|.|:          ||...:...||      .|...|    .|.::| :.|...:.
  Rat   387 LDNVYQ-GGGVCL----------DCQHHTTGINCERCVPGFYRAPD----QPLDSP-HVCQPCDC 435

  Fly   962 ECDYSQCLPLEKKCDGYADCEDMSDELEC-------------QSYTD--HC--LES--EFECDSY 1007
            |.|::         ||  .|||::....|             :.|.|  ||  |.|  ..:....
  Rat   436 ESDFT---------DG--TCEDLTGRCYCRPNFTGERCSACAEGYVDFPHCYPLPSFPHNDTGEQ 489

  Fly  1008 CLPRDQLCNGIPNCQDGSDERNCTFCREDAYLCNTGECVA-DNQRCNGIADCADGSDERHCARIY 1071
            .||..|:.|  .:|.....:.|.  ||:|..|   |.||. .|.:.|....||.|.....|....
  Rat   490 VLPAGQIVN--CDCNAAGTQGNA--CRKDPRL---GRCVCKPNFQGNHCELCAPGFYGPSCHPCQ 547

  Fly  1072 CPPNKLACNGTCVSRRIKCDGIRDCLDGYDE---MYCPETNNHYPTQNVNVIRPKLGPNP---IP 1130
            |....:| ||.|.....:|    .|..|::.   .:|.....|:|...:      .|.:|   :|
  Rat   548 CSSPGVA-NGLCDPESGQC----TCRTGFEGDKCDHCALGYFHFPLCQL------CGCSPAGTLP 601

  Fly  1131 K--------SCRP--------------------HEWQCANLECIDSSLQCNEIKDCSDGSDEELS 1167
            :        .|||                    |...|.....:|.......:..|..|      
  Rat   602 QGCDESGHCQCRPGFDGPHCDRCLPGYHGYPDCHACACDPRGSLDQQCGAGGLCHCRPG------ 660

  Fly  1168 VCFGTATTRLKPSDCSPEQFYCDESCYNRSVRCNG--HVDCSDGSDEVGC-----SLPC------ 1219
              :..||.:    :||| .||...||.......:|  |..|...:.:..|     .|.|      
  Rat   661 --YTGATCQ----ECSP-GFYGFPSCIPCHCSADGSMHTTCDPTTGQCRCRPRVTGLRCDMCVPG 718

  Fly  1220 ------------------------PQHQCP-SGRCYTESERCDRHRHCEDG------SDEANCCY 1253
                                    |:.|.| :.|.:.|...|||   |:.|      |:...|  
  Rat   719 AYNFPYCEAGSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDR---CKPGYWGLSSSNPEGC-- 778

  Fly  1254 ANQFRCNNGDCVSGSAPCNGYSEC--------------------SDHSDELNCGGTQECLPNQFR 1298
             .:..|:....:.|...|.|..:|                    .||:|...|   :.|     |
  Rat   779 -TRCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFGLDHADYYGC---RSC-----R 834

  Fly  1299 CNSGQCVSSSVRCNGRTD---CQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESREVIFRCR 1360
            |:.|..:...  |..:|.   |:.::...:|:..:.|.        ..||...|:...|      
  Rat   835 CDVGGALGQG--CEPKTGACRCRPNTQGPSCSEPAKDH--------YLPDLHHIRLELE------ 883

  Fly  1361 DEGPARAKVKWSRPGGRPLPPGFTDRNGRLEIPNIRVEDAGTYVCEAVGYASYIPGQ-QVTVNLN 1424
                     :.:.|.|..:..||..    ||..|....          |||.....| ::...||
  Rat   884 ---------EAATPEGHAVRFGFNP----LEFENFSWR----------GYAHMTAIQPRIVARLN 925

  Fly  1425 VE---------RYNDVGSRPESACTEYQATCMNGECI----DKSSICDGNPDCSDASDEQSCSLG 1476
            |.         ||.:.||           |.:||:..    .|.|.|   .:|::.|        
  Rat   926 VTSPDLFRLVFRYVNRGS-----------TSVNGQVSVREEGKFSSC---TNCTEQS-------- 968

  Fly  1477 LKCQPNQFMCSNSKCV---------------DRTW----RCDG--------------ENDCGDNS 1508
               ||..|..|.....               ..||    ..:|              |.....:.
  Rat   969 ---QPVAFPPSTEPAFVTVPQRGFGEPFVLNPGTWALLVEAEGVLLDYVVLLPSTYYEAALLQHR 1030

  Fly  1509 DETSCDPEPS-----------------GAP-CRYNEFQCRSGHCIPKSFQCDNV-----PDCTDG 1550
            ...:|...||                 |.| ....|..||..:.:|:....:.:     |..|..
  Rat  1031 VTEACTYHPSALHPTENCLLYAHLPLDGFPSAAGTEALCRHDNSLPRPCPTEQLSPLHPPLATCA 1095

  Fly  1551 TDEVGCMAPLPIRPPPQSVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVPDKCESKSYGGTGTL 1615
            ..:|.....:.:..|.:...::|| |.|.:....|...          |.|.:...:  |.....
  Rat  1096 GSDVDIQLEMAVPRPGRYALVVEY-VSEYSHQEMGVAV----------HTPQRAPQQ--GMIDLH 1147

  Fly  1616 RCP----------DMRPQ------DSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNM 1664
            .||          |.:..      ||.| |..:...:...|::..|::.|.....:..|...|  
  Rat  1148 PCPYSSLCRGPARDTQHHLAVFHLDSEA-SIRLTAEQAHFFLHSVTLIPVEEFSAEFVEPRVF-- 1209

  Fly  1665 LARKAEECVQCF-CFGVAKACDSANLFTYAIHPPILSHRVV-----------SVELSPLRQIVIN 1717
                   ||... .|....|...|:.|.....|.:|....|           |.||||....|..
  Rat  1210 -------CVSSHGAFNPGSAACLASRFPKPPQPIVLKDCQVLPLPPDLPLTQSQELSPGASPVGP 1267

  Fly  1718 EAAP--------GQDLLTLLHGVQFRATNVHFSGR--------ETPYLALPAD--------YMGN 1758
            :..|        ...|:....|.....|.|...||        :..:.:.|.:        :.|:
  Rat  1268 QPRPPTAVDPNAEPTLIRHPQGTVVFTTQVPTLGRYAFLLHSYQPVHPSFPVEVLIDGGRIWQGH 1332

  Fly  1759 QLKSY---GGNLRYEVNYRGSGRPVNGPDVIITGNRFTLTYRVRTQPGQNNRVSIPFVPGGWQKP 1820
            ...|:   |...|..|:..|...      :.:|.|...:|.||                     |
  Rat  1333 ANASFCPHGYGCRTLVSCEGQTM------LDVTDNELAVTVRV---------------------P 1370

  Fly  1821 DGRKASREEIMMI-------------------------------------------LANVDNILI 1842
            :||....:.|:::                                           .|...::..
  Rat  1371 EGRWLWLDYILVVPEDAYSSSYLQEEPLDKSYDFISHCATQGYHISPSSSSLFCRNAATSLSLFY 1435

  Fly  1843 RLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCESCASGYVRQPG---- 1903
            ..|.|.....||..:....:..|            .:|.|....:|..|..||:||...|.    
  Rat  1436 NNGALPCGCHEVGAVGPTCEPFG------------GQCPCRGHVIGRDCSRCATGYWGFPNCRPC 1488

  Fly  1904 --GPWL-----GHC------VPFIPDS--CPSGTYG-DPRRGVPCKECPCPLTGSNNFASGCQQS 1952
              |..|     |.|      ||  ||.  |...::| .|..|  |:||.|...|...........
  Rat  1489 DCGARLCDELTGQCICPPRTVP--PDCLVCQPQSFGCHPLVG--CEECNCSGPGVQELTDPTCDM 1549

  Fly  1953 PDGDVVCRCNEGYTGRRCEQCAAGYQGNPLAAGGICRRIPDTSCNVDGTYSVHSN---GTCQCKD 2014
            ..|.  |||.....||||:.||.|:...|     .||   ...|:..||.:...:   |.|.||:
  Rat  1550 DSGQ--CRCRPNVAGRRCDTCAPGFYSYP-----SCR---PCDCHEAGTMASVCDPFTGQCHCKE 1604

  Fly  2015 SVIGEQCDTCKSKSFHLNSFTYTGCIECFCSGVGLDCDSSTWYRDQVTSTFGRSRVDHGFVLVTN 2079
            :|.|.:||.|:..:|.|::....||..|||.|....|.:|.:.|.:....       .|:||:::
  Rat  1605 NVQGSRCDQCRVGTFSLDAANPKGCTRCFCFGATERCGNSNYARHEFMDM-------EGWVLLSS 1662

  Fly  2080 YMQPTP------------------DTVPVSMAAEPNALSFIGSADQSGNTLYWSLPAAFLGNKLS 2126
            ..|..|                  ||.|                     .|||..|.::||:::|
  Rat  1663 DRQVVPHEHRPEMELLHADLRLVADTFP---------------------ELYWQAPPSYLGDRVS 1706

  Fly  2127 SYGGKLTYTLSYSPLPNG--IMSRNSAPDVVIKSGEDLRLIHYRKSQVVPSVANTYSVEIKESAW 2189
            ||||.|.|.| :|....|  .:...|.||||:: |..:.:.....:...|...:...:::.|..:
  Rat  1707 SYGGTLHYEL-HSETRRGDVFIPYESRPDVVLQ-GNQMSIAFLELAYPSPGQVHRGQLQLVEGNF 1769

  Fly  2190 QRGD-EVVANREHVLMALSDITAIYIKATYTTSTKEASLRQVTLDVATPTNLGTPRAVEVEQCRC 2253
            :..: ....:||.::|.|:.:..:.|:|.::.::...|||:|.|:||:... |.|.|..||.|.|
  Rat  1770 RHLETHNPVSREELMMVLAGLEQLQIRALFSQTSSTVSLRRVVLEVASEAG-GGPPASNVELCMC 1833

  Fly  2254 PEGYLGLSCEQCAPGYARDPEGGIYLGLCRPCECNGHSKYCNSDTGDCEECSDNTEGPSCERCAA 2318
            |..|.|.||::|||||.||.: |::||.|.||:|:|||..|...:|.|..|..||||..||||..
  Rat  1834 PANYRGDSCQECAPGYYRDTK-GLFLGRCVPCQCHGHSDRCLPGSGTCVGCQHNTEGDQCERCRP 1897

  Fly  2319 GYVGDATRGTIYDCQP-DEGYPIPSPPAPGNQTLECTAYCQIEGIYDCRG-NECLCKRNVIGDQC 2381
            |:|..         .| |...|..|.|.|    |...:....:|.....| .:|||:....|..|
  Rat  1898 GFVSS---------DPSDPASPCVSCPCP----LAVPSNNFADGCILRNGRTQCLCRPGYAGASC 1949

  Fly  2382 DQCRPGTYGLSAQNQDGCKECYCSG------LASQCRSAALYRQLIPVDFILNAPLITDESGAVQ 2440
            ::|.||.:|........|:.|.|||      :.|.|                 .||.....|.::
  Rat  1950 ERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMIFSDC-----------------DPLTGACRGCLR 1997

  Fly  2441 DTENLIPDISRNMYTYTHTSYLPKYWSLRGSVLGNQLFSYGGRLSYSLIVESYGNYERGHDIVLI 2505
            .|..                  |:..|......||.|                          |.
  Rat  1998 HTTG------------------PRCESCAPGFYGNAL--------------------------LP 2018

  Fly  2506 GNGLKLIWSRPDGNENQEEYNVRLHEDEQWTRQDRESARPASRSDFMTVLSDLQHILIRATPRVP 2570
            ||..:...| |.|.|..         |.|..|...::.....|.|         |.|        
  Rat  2019 GNCTRCDCS-PCGTETC---------DPQTGRCLCKAGVTGQRCD---------HCL-------- 2056

  Fly  2571 TQSTSIGNVILES-------AVTTRTPGATHASDIELCQCPSGYVGTSCESCAPLHYRDASGSCS 2628
                 .|:...|.       |......|:........|.|..|..|..|..|||.::......|.
  Rat  2057 -----EGHFGFEQCQGCHPCACGPAAEGSECNPQTGQCHCRPGTTGPQCLECAPGYWGLPEKGCR 2116

  Fly  2629 LCPCDVSNTESCDLVSGGYVECRCKARWKGDRCREIDT----------NDPTDIGTEDPVLTQII 2683
            .|.|...:   ||..:|   .|.|.....|:||   ||          ..|...|....|....:
  Rat  2117 RCQCPRGH---CDPHTG---RCTCPPGLSGERC---DTCSQQHQVPVPGRPGSHGIHCEVCDHCV 2172

  Fly  2684 VSIQKPEITIVPVGGSMTLSCSGRMRWSNSPVIVNWYKENSRLPENVEVQGGNLYLYDLQV---S 2745
            |.:    :..:...|::..|...::|..|:.... |.:.: ||         |..:.|||.   |
  Rat  2173 VLL----LDDLERAGALLPSIREQLRGINASSTA-WARLH-RL---------NASIADLQSKLRS 2222

  Fly  2746 DSGVY-----ICQAVNNETASVFKDTVSI--------------------TITRYAQEMLARYEKD 2785
            ..|.:     ..|.:..::.|:.:||..:                    |:.| ||::|      
  Rat  2223 PLGPHNQTAEQLQTLEQQSISLQQDTERLGSQATGVQDQAGRLLDNTESTLVR-AQKLL------ 2280

  Fly  2786 QLSPAEIVNLPSHVTFEEYVNNEIICEVLGNPAPRVT-------WARVDGHADAQSTRTYDNRLI 2843
                 |||...|...      ||:..:  |.|....|       ||..:           ..||:
  Rat  2281 -----EIVQAVSRAL------NELASQ--GFPGNATTPSGEQLRWALAE-----------VERLL 2321

  Fly  2844 FDSPRKSDEGRYRCQAENDQNRDEKYVIVYVQSNPPQPPPQQDRLYITPEEINGLAGESFQLNCQ 2908
            :|. |..|.|..:..||.:.                   .:..||....:|             |
  Rat  2322 WDM-RTRDLGAPQAVAEAEL-------------------AEAQRLMARVQE-------------Q 2353

  Fly  2909 FTSVASLRYDWSHNGRSLSSSPARNVEIRGNTLEVRDASESDSGVYTCVAYDVRTRRNFTESARV 2973
            .||.      |..|....:....:..:.....:::|:|  .:..|.|....|....|| .|..|.
  Rat  2354 LTSF------WEENQALATHIRDQLAQYESGLMDLREA--LNHAVNTTREADELNSRN-EERLRE 2409

  Fly  2974 NIDRREEQPFGNKPIIESLEQNIL-------IIQGEDYS------ITCEASGSPYPSIKWAKVHD 3025
            .:..::|....|..:..:|:...|       ::||.|.:      :.....|:..|.:|  ::..
  Rat  2410 ALQWKQELSQDNATLKATLQAASLTLAHVSELLQGIDKAKEDLEHLAASLDGAWTPLLK--RMQA 2472

  Fly  3026 FMPENVHISGNVLTIYGARFENRGVYSCVAENDHGSDLSSTSID-IEPRERPSVKIVSAPLQTFS 3089
            |.|                                   :|:.:| :|..|..:.|:....:....
  Rat  2473 FSP-----------------------------------ASSKVDLVEAAEAHAQKLNQLAINLSG 2502

  Fly  3090 VGAPASLYCTVEGI-PDPTVEWVRVDGQPLSPRHKIQSPGY-MVIDDIQ-LEDSGDYECRAKN-- 3149
            :         ::|| .|..::           |....|..| .::..:| .||:..:..|..:  
  Rat  2503 I---------IQGINQDRFIQ-----------RAVEASNAYSSILQAVQAAEDAAGHALRQASRT 2547

  Fly  3150 ---IV--GEATGVATITVQEPTLVQIIPDNRD-LRLTEGDELSLTCVGSGVPNPEVEWVNEMALK 3208
               :|  |.|.|...:......||:.|..::: |.|..|   .|...|:.:              
  Rat  2548 WEMVVQRGLAAGARQLLANSSALVETILGHQERLGLAHG---RLQAAGTQL-------------- 2595

  Fly  3209 RDLYSPPSNTAILKIYRVTKADAGI---------YTCHGK---NEAGSDEAHVRVEVQ------E 3255
            ||:.:..:..|.    ::.:|.|.:         ...|.|   .||....|||:.::|      |
  Rat  2596 RDVRAKKNQLAA----QIQEAQAMLAMDTSETSEKIAHAKAVAAEARDTAAHVQSQLQGMQKNVE 2656

  Fly  3256 R-RGDIGGV----------DDDSDRDPINYNPPQ-------QQNPGIHQPGSNQLLATDIGDNVT 3302
            | :..:||:          |..|....:....||       .:|.|:|  .::..|:.:||    
  Rat  2657 RWQSQLGGLRGQDLSQAERDASSSVSTLEKTLPQLLAKLSHLENRGVH--NASLALSANIG---- 2715

  Fly  3303 LTCDMFQPLNTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGNVKTYFVKELV 3367
                          ||  ..|...|.:..|::::         ..:.|  ||.| |:....::|.
  Rat  2716 --------------RV--RKLIAQARSAANKVKV---------SMKFN--GRSG-VRLRTPRDLA 2752

  Fly  3368 -LMPLPRIRFYPNIPLTV-EAGQN------------------LDVHCQVENVRPEDVHWSTDNNR 3412
             |.....::||...|:.. |.|:|                  :.|     ::|.:.|||......
  Rat  2753 DLAAYTALKFYIQSPVPAPEPGENTGDRFVLYMGSRQATGDYMGV-----SLRNQKVHWVYRLGE 2812

  Fly  3413 PLPSSVRI---VGSVLRFVSITQAAAGEYRCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRH 3474
            ..|:::.|   :|.....|||.:..          |:|:.|    |.|:|.. .|::....:...
  Rat  2813 AGPTTLSIDENIGEQFAAVSIDRTL----------QFGHMS----VTVEKHM-VHEIKGDTVAPG 2862

  Fly  3475 REGENIQLQCTVTDQYGVRAQDNVEFNWFRDDRRPLPNNARTDSQILVLTNLRPEDAGRYICNSY 3539
            |||                                             |.||.|:|...|:..  
  Rat  2863 REG---------------------------------------------LLNLNPDDFVFYVGG-- 2880

  Fly  3540 DVDRGQQLPEVSIDLQVLRAPQYPYNRFKGGVSLKDTPCMVLYICAAATPPPNSPIYLPPQLPAK 3604
                                  ||.|                     .|||  .|:..|..|...
  Rat  2881 ----------------------YPSN---------------------FTPP--EPLRFPGYLGCI 2900

  Fly  3605 SRD------YSLKLDDQSSNLR-------AGESTDVECYSSDDTYTD------VVWER--SDGAP 3648
            ..|      .||...:|:..|.       |...|..:.:.:|.:|.|      :.:|:  |:...
  Rat  2901 EMDTLNEEVVSLYNFEQAFKLTTAVDKPCARSKTTGDPWLTDGSYLDGSGFARITFEKQFSNTKR 2965

  Fly  3649 LSNNVRQVGNRLVISNVSPSDAGNYVCKCKTDEGDL---------------------YTTSYK-- 3690
            ....:|.|....:|..:...:  .::|....| |.|                     .|.:.|  
  Rat  2966 FEQELRLVSYNGIIFFLKQEN--QFLCLAVQD-GTLVLLYDFGSGLKRADPLQPPQALTAASKAI 3027

  Fly  3691 -------------LEVE-------DQPHELKSSKIVYAKVGANADLQCGADESRQPTYRWSRQYG 3735
                         :.||       ||.:||:.:...|        |.....|...|:.|  |.:.
  Rat  3028 QVFLLAGARKRVLVRVERATVFSVDQDNELEMADAYY--------LGGVPPEELPPSLR--RLFP 3082

  Fly  3736 QLQAGRSLMNEKLSL----DSVQANDAG-TYICTAQYADGETADF----------PNILVVTGAI 3785
            ...:.|..:....:|    |..:.|..| ::.|||....|.|..|          |::..:||.:
  Rat  3083 SGGSVRGCIKGIKALGKYVDLKRLNTTGISFSCTADLLMGRTMTFHGHGFLPLALPDVAPITGEV 3147

  Fly  3786 PQFRQEPRSYMSFPTLPNSSFKFNFELTFRPENGDGLLLFNGQTRG------SGDYIALSLKDRY 3844
                     |..|              .||....|.||.:.....|      .|.::.|...:|.
  Rat  3148 ---------YSGF--------------GFRGTQDDNLLYYRTSPDGPYQVSLRGGHVTLQFMNRE 3189

  Fly  3845 AEFRFDFG-GKPMLVRAEEPLALNEWHTVRVSRFKRDGYIQVDEQ-HPV-----AFPTLQQIPQL 3902
            .|.:..|. |.|..|....       :..||       ::.||:| .||     ..|.||..|:.
  Rat  3190 VETQRVFADGAPHYVAFYS-------NVTRV-------WLYVDDQLQPVKSREGTTPMLQLQPEE 3240

  Fly  3903 DLIEDLYIGGVPNWELLPADAVSQQV-GFVGCISRLTLQGRTVELIREAKYKEGITDCRPCAQGP 3966
            .  ..|.:||:|         :|... .|.||||.:        .::..:..:.:.|..      
  Rat  3241 P--PRLLLGGLP---------MSGTFHNFSGCISNV--------FVQRLRGPQRVFDLH------ 3280

  Fly  3967 CQNKGVCLESQTEQAYTCICQPGWTGRDCAIEGTQCTPG---VCGA------GRCENTENDMECL 4022
             ||.|....|                       ..|||.   ..||      .|......|:.|:
  Rat  3281 -QNMGSVNVS-----------------------VGCTPAQLQTSGATAQKVSRRSRQPSQDLTCM 3321

  Fly  4023 CP--LNRSGDRCQYNEILNEHSLNFKGNS---FAAYGTPKVTKVNITLSVRPASLEDSVILYTA- 4081
            .|  |....|..|:..         .|.|   |.........::::::.|||......::||.| 
  Rat  3322 TPWLLGTIQDAYQFGG---------PGPSYLQFVGVSPSHRNRLHLSMLVRPHGASQGLLLYVAP 3377

  Fly  4082 -ESTLPSGDYLALVLRGGHAELLINTAARLDPVVVRSAEPLPLNRWTRIEIRRRLGEGILRVGDG 4145
             .|..||     |||...|...:..|......:..:|.:.....:|.|:.:|..: :.:..|.||
  Rat  3378 LSSHSPS-----LVLFLNHGRFVAQTEGPGPQLQAQSRQHSRAGQWHRVSVRWGM-QQVQLVVDG 3436

  Fly  4146 --------PERKA-KAPGSDRILSLKTHLYVGGYDRSTVKVNRDVNITKGFDGCISRLYNFQKPV 4201
                    |.|:. :|.|.....     |:|||....:......|::  ||.||:.:|...::|:
  Rat  3437 SQTWSQKAPHRRVHRAEGPQHYT-----LFVGGLPAGSYSSKLPVSV--GFSGCMKKLQLDKRPL 3494

  Fly  4202 NLLADIKDAANIQSCGETNMIGGDEDSDNEPPVPPPTPDVHENELQPYAMAPCASDPCENGGSCS 4266
            .              ..|.|:|                           :.||.|.|.|:|    
  Rat  3495 R--------------APTRMVG---------------------------VTPCVSGPLEDG---- 3514

  Fly  4267 EQEDVAVCSCPFGFSGKHCQEHLQLGFNASFRGDGYVELNRSHFQPALEQSYTSMGIVFTTNKPN 4331
                                    |.|..|   :|.|.|.    .|..:..:.|:.:........
  Rat  3515 ------------------------LFFPGS---EGAVTLE----LPKAKMPHVSLELEVRPLAAA 3548

  Fly  4332 GLLFWWGQEAGEEYTGQDFIAAAVV----DGYVEYSMRLDGEEAVIRNSDIRVDNGERHIVIAKR 4392
            ||:|..||.....|.....:...|:    ||..|:|..:         :..::.:|:.|.|...:
  Rat  3549 GLIFHLGQAHATPYVQLQLLTEQVLLRANDGAGEFSTWV---------TYPKLCDGQWHQVTVIK 3604

  Fly  4393 DENTAILEVDRMLHSGETRPTSKKSM-KLPGNVFVGGAPDLE-------VFTGFRYKHNLNGCIV 4449
            ..||..||||  .||..|.....::: ..|..:.:|..|..|       .:.|...|...||   
  Rat  3605 GRNTLRLEVD--THSNHTTGRLPETLADSPALLHLGSPPKSEAAWPEPPAYRGCLRKLLFNG--- 3664

  Fly  4450 VVEGETVGQINL-SSAAVNG-VNANVCPA 4476
                   ..:|: :||.:.| |..:.||:
  Rat  3665 -------APVNMTASARIQGAVGMSGCPS 3686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060 5/20 (25%)
LDLa 704..739 CDD:238060 3/34 (9%)
LDLa 813..847 CDD:238060 8/36 (22%)
LDLa 852..887 CDD:238060 11/41 (27%)
LDLa 902..936 CDD:238060 8/33 (24%)
LDLa 956..990 CDD:238060 8/33 (24%)
LDLa 997..1030 CDD:238060 8/36 (22%)
LDLa 1033..1067 CDD:238060 12/34 (35%)
LDLa 1072..1105 CDD:238060 8/35 (23%)
LDLa 1133..1165 CDD:238060 8/51 (16%)
LDLa 1182..1215 CDD:238060 10/34 (29%)
LDLa 1221..1251 CDD:238060 10/36 (28%)
LDLa 1252..1286 CDD:238060 8/53 (15%)
LDLa 1292..1326 CDD:238060 7/36 (19%)
Ig 1344..1405 CDD:472250 11/60 (18%)
Ig strand B 1355..1359 CDD:409353 0/3 (0%)
Ig strand C 1369..1372 CDD:409353 0/2 (0%)
Ig strand E 1388..1392 CDD:409353 1/3 (33%)
LDLa 1439..1473 CDD:238060 8/37 (22%)
LDLa 1479..1513 CDD:238060 8/66 (12%)
LDLa 1522..1556 CDD:238060 7/38 (18%)
Ig_Perlecan_like 1574..1649 CDD:143220 16/90 (18%)
Ig strand B 1577..1583 CDD:143220 1/5 (20%)
Ig strand C 1590..1595 CDD:143220 0/4 (0%)
Ig strand E 1613..1617 CDD:143220 0/3 (0%)
Ig strand F 1626..1632 CDD:143220 2/5 (40%)
Ig strand G 1641..1647 CDD:143220 1/5 (20%)
Laminin_B 1748..1878 CDD:459652 22/183 (12%)
EGF_Lam 1935..1989 CDD:238012 15/53 (28%)
Laminin_B 2113..2249 CDD:459652 39/138 (28%)
EGF_Lam <2250..2276 CDD:238012 14/25 (56%)
EGF_Lam 2284..2333 CDD:238012 20/48 (42%)
Laminin_EGF <2369..2399 CDD:395007 9/29 (31%)
Laminin_B 2465..2599 CDD:459652 22/140 (16%)
Ig_3 2688..2756 CDD:464046 14/75 (19%)
Ig_3 2791..2861 CDD:464046 18/76 (24%)
Ig_3 2890..2958 CDD:464046 10/67 (15%)
Ig 2987..3071 CDD:472250 12/97 (12%)
Ig strand B 3004..3008 CDD:409353 0/9 (0%)
Ig strand C 3017..3021 CDD:409353 1/3 (33%)
Ig strand E 3036..3040 CDD:409353 0/3 (0%)
Ig strand F 3050..3055 CDD:409353 0/4 (0%)
Ig strand G 3063..3066 CDD:409353 0/2 (0%)
I-set 3089..3162 CDD:400151 14/82 (17%)
Ig strand B 3094..3098 CDD:409353 0/3 (0%)
Ig strand C 3107..3111 CDD:409353 0/3 (0%)
Ig strand E 3128..3132 CDD:409353 1/4 (25%)
Ig strand F 3142..3147 CDD:409353 0/4 (0%)
Ig strand G 3155..3158 CDD:409353 1/2 (50%)
Ig 3165..3253 CDD:472250 20/100 (20%)
Ig strand B 3185..3189 CDD:409353 1/3 (33%)
Ig strand C 3198..3202 CDD:409353 0/3 (0%)
Ig strand E 3219..3223 CDD:409353 1/3 (33%)
Ig strand F 3233..3238 CDD:409353 0/13 (0%)
Ig strand G 3246..3249 CDD:409353 1/2 (50%)
Ig 3298..3355 CDD:472250 8/56 (14%)
Ig strand B 3301..3305 CDD:409353 0/3 (0%)
Ig strand C 3313..3316 CDD:409353 0/2 (0%)
Ig strand E 3333..3336 CDD:409353 0/2 (0%)
IG_like 3381..3457 CDD:214653 19/97 (20%)
Ig strand B 3390..3394 CDD:409353 1/3 (33%)
Ig strand C 3403..3407 CDD:409353 2/3 (67%)
Ig strand F 3437..3442 CDD:409353 0/4 (0%)
IG_like 3475..>3536 CDD:214653 9/60 (15%)
Ig strand B 3480..3484 CDD:409353 0/3 (0%)
Ig strand C 3491..3503 CDD:409353 0/11 (0%)
Ig strand E 3519..3523 CDD:409353 0/3 (0%)
Ig 3613..3675 CDD:472250 12/76 (16%)
Ig strand B 3625..3629 CDD:409353 1/3 (33%)
Ig strand C 3637..3642 CDD:409353 1/10 (10%)
Ig strand E 3658..3662 CDD:409353 0/3 (0%)
IG_like 3706..3772 CDD:214653 15/70 (21%)
Ig strand B 3714..3718 CDD:409353 1/3 (33%)
Ig strand C 3727..3731 CDD:409353 1/3 (33%)
Ig strand E 3746..3750 CDD:409353 0/3 (0%)
Ig strand F 3760..3765 CDD:409353 1/4 (25%)
Ig strand G 3774..3777 CDD:409353 1/12 (8%)
LamG 3794..3939 CDD:238058 37/158 (23%)
EGF 3962..3994 CDD:394967 4/31 (13%)
LamG 4042..4195 CDD:238058 37/166 (22%)
EGF_CA 4254..4286 CDD:238011 5/31 (16%)
LamG 4295..4448 CDD:238058 37/164 (23%)
Lama5NP_001178538.1 Laminin_N 49..302 CDD:459653 43/230 (19%)
EGF_Lam 303..351 CDD:238012 13/52 (25%)
EGF_Lam 362..425 CDD:238012 18/81 (22%)
EGF_Lam 432..473 CDD:238012 10/51 (20%)
EGF_Lam 499..546 CDD:214543 15/51 (29%)
EGF_Lam 545..588 CDD:238012 10/47 (21%)
Laminin_EGF 592..639 CDD:395007 7/46 (15%)
Laminin_EGF 637..684 CDD:395007 13/59 (22%)
EGF_Lam 681..723 CDD:238012 6/41 (15%)
EGF_Lam 780..831 CDD:238012 9/53 (17%)
EGF_Lam 832..>871 CDD:238012 9/53 (17%)
Laminin_EGF 1442..1490 CDD:395007 12/59 (20%)
Laminin_EGF 1532..1583 CDD:395007 17/60 (28%)
Laminin_EGF 1581..1629 CDD:395007 14/47 (30%)
Laminin_B 1693..1829 CDD:459652 39/138 (28%)
EGF_Lam 1863..>1899 CDD:238012 18/35 (51%)
Laminin_EGF 1914..1967 CDD:395007 14/56 (25%)
EGF_Lam 1969..2022 CDD:238012 18/113 (16%)
EGF_Lam 2024..2068 CDD:214543 13/75 (17%)
EGF_Lam 2070..2116 CDD:238012 10/45 (22%)
EGF_Lam 2118..2168 CDD:214543 14/58 (24%)
Laminin_I 2193..2448 CDD:310534 63/338 (19%)
Smc <2309..>2616 CDD:440809 71/437 (16%)
Laminin_II 2639..2760 CDD:368703 30/154 (19%)
LamG 2781..2908 CDD:214598 37/238 (16%)
LamG 2943..3095 CDD:238058 26/164 (16%)
LamG 3151..3269 CDD:214598 36/164 (22%)
LamG 3338..3490 CDD:238058 38/164 (23%)
LamG 3514..3663 CDD:238058 38/194 (20%)
Blue background indicates that the domain is not in the aligned region.

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