DRSC/TRiP Functional Genomics Resources

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Protein Alignment trol and prtg

DIOPT Version :10

Sequence 1:NP_001401049.1 Gene:trol / 45320 FlyBaseID:FBgn0284408 Length:4489 Species:Drosophila melanogaster
Sequence 2:XP_004912757.1 Gene:prtg / 100496178 XenbaseID:XB-GENE-922463 Length:1173 Species:Xenopus tropicalis


Alignment Length:849 Identity:177/849 - (20%)
Similarity:296/849 - (34%) Gaps:233/849 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  2886 DRLYI-TPEEINGLAGESFQLNCQFTSVASLRYDWSHNGRSLSSSPARNVEIRGNTLEVRDA--- 2946
            |.::: .|:::..|..:|..|:|.....|.:...|..||..:|.: .|...:...:|.:|:|   
 Frog    29 DLMFVKEPQDVIILRRDSVVLDCLANGEAPITVTWMKNGVKISEN-ERISTLHNGSLYIREAEGR 92

  Fly  2947 --SESDSGVYTCVAYDVRTRRNFTESARVNIDRREEQPFGNKPIIESLEQNILIIQGEDYSITCE 3009
              .:||.|.|.|:|.:   :.....|.|.::.......|..:|:      ::.:..|.....:|:
 Frog    93 KGDQSDEGFYQCLALN---KFGAILSQRAHLSFASMSGFEEQPV------SVQVQHGSVARFSCK 148

  Fly  3010 ASGSPYPSIKWAKVHDFMPENVH----ISGNVLTIYGARFENRGVYSCVA---ENDHGS------ 3061
            .:.:|...|.|......:|..:.    :|..||.|||....:.|.|.|||   .|...|      
 Frog   149 ITANPPAVITWEVNRTALPLAMDRITVLSKGVLQIYGVTKRDAGNYRCVATSVSNRRKSTEAVLT 213

  Fly  3062 -----------DLSSTSIDIEPRERPSVK--IVSAPLQ--TFSVGAPASLYCTVEGIPDPTVEWV 3111
                       .||.|.:.:..:|:...:  ::.||.|  |.|:....:|.|...|.|.|.|.|.
 Frog   214 VVPGERLNPRHHLSQTQLTLRAKEKKYFQKPVIIAPPQNITTSMHQSVTLECVATGNPKPIVSWS 278

  Fly  3112 RVDGQPLSP-RHKIQSPGYMVIDDIQLEDSGDYECRAKNIVGEATGVATITVQEPTLVQIIPDN- 3174
            |.|.:|:.. ..::...|.::|.|::...||.|.|||     ...|....||...|:..:.|.: 
 Frog   279 RRDHKPIDVFNTRVVGNGNLIISDVKPHHSGVYICRA-----TTPGTRNFTVAMTTVTVLAPPSF 338

  Fly  3175 ----RDLRLTEGDELSLTCVGSGVPNPEVEWV-NEMALKRDLYSPPSNTAI------LKIYRVTK 3228
                ..|.:.........|...|.|.|::.|: |...:.       ||..|      |.|..:..
 Frog   339 TEWPASLTMPRASTARFVCQAEGNPVPKISWLKNGQKIN-------SNGRIKMYNSKLVISHIMP 396

  Fly  3229 ADAGIYTCHGKNEAGSDEAHVRVEVQERRGDIGGVDDDSDRDPINYNPPQQQNPGIHQPGS-NQL 3292
            .|..:|.|..:|..||..:..|:.|                  :.|.         |:|.: .||
 Frog   397 EDDAVYQCMAENSQGSVLSRARLIV------------------VMYE---------HRPSAPRQL 434

  Fly  3293 LATDIGDNVTLTCDMFQPLNTRWERVDGAPLPRNAYTIKNRLEIVRVEQQNLGQYRCNGIGRDGN 3357
            .|..:..:..:         ..|||    ||..:...|...:..::.|..|..:|:. .||.|  
 Frog   435 RAETMSSSAII---------LSWER----PLYNSEKIIAYSVHYMKAEGLNNEEYQV-VIGND-- 483

  Fly  3358 VKTYFVKELVLMPLPRIRFYPNIPLTVEAGQNLD--VHCQVENV------------RPEDV---- 3404
             .|:::.: .|.|.....||....:.:.|.|..|  ....:|:|            .|.||    
 Frog   484 -TTHYIID-DLDPASNFTFYVVAYMPMGASQMSDHVTQSTLEDVPLRAPEISLTSRSPTDVLISW 546

  Fly  3405 -------------HW------STDN---NRPLPSSVR---IVG------SVLRFVSITQAAAGEY 3438
                         |:      ||:|   |..||.|..   :.|      .::|..:.|:...|| 
 Frog   547 LPISAKFRRGKIIHYRLSYRMSTENTTHNVELPGSTHEYFLEGLNSDTLYLVRIAAATKVGWGE- 610

  Fly  3439 RCSAFNQYGNRSQIARVAVKKPADFHQVPQSQLQRHREGENIQ---LQCTVTDQYGVRAQDNVEF 3500
             .||:..                  |:.|:|...|......::   |.||           .:..
 Frog   611 -SSAWTS------------------HRTPKSTSIRAPRSPELRLDPLNCT-----------TITV 645

  Fly  3501 NWFRDDRRPLPNNART-DSQILVLTNLRPEDAGRYICN--SYDVDRGQQLPEVSIDLQVLRAPQY 3562
            .|.:|     |::..| ....|.......:::|..:.:  .:|.:.|...|.....:::|     
 Frog   646 RWQQD-----PDDTATIQGYKLYYKEEGQQESGPVLLDVKDFDYNIGGLDPRKKYHVRLL----- 700

  Fly  3563 PYNRFKGGVSLKDTPCMVLYICAAA----TPPP------------NSPIYL----PPQLPAKSRD 3607
            .||....|.....|  :...:|.:|    .|||            :|.|||    |....||:.:
 Frog   701 AYNNMDEGYQADQT--VSTPVCVSAPDHVNPPPPPPHHLYAKANSSSSIYLHWGRPAFSSAKAIN 763

  Fly  3608 YSLK 3611
            |:::
 Frog   764 YTVR 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trolNP_001401049.1 LDLa 447..480 CDD:238060
LDLa 532..564 CDD:238060
LDLa 571..606 CDD:238060
LDLa 616..650 CDD:238060
LDLa 704..739 CDD:238060
LDLa 813..847 CDD:238060
LDLa 852..887 CDD:238060
LDLa 902..936 CDD:238060
LDLa 956..990 CDD:238060
LDLa 997..1030 CDD:238060
LDLa 1033..1067 CDD:238060
LDLa 1072..1105 CDD:238060
LDLa 1133..1165 CDD:238060
LDLa 1182..1215 CDD:238060
LDLa 1221..1251 CDD:238060
LDLa 1252..1286 CDD:238060
LDLa 1292..1326 CDD:238060
Ig 1344..1405 CDD:472250
Ig strand B 1355..1359 CDD:409353
Ig strand C 1369..1372 CDD:409353
Ig strand E 1388..1392 CDD:409353
LDLa 1439..1473 CDD:238060
LDLa 1479..1513 CDD:238060
LDLa 1522..1556 CDD:238060
Ig_Perlecan_like 1574..1649 CDD:143220
Ig strand B 1577..1583 CDD:143220
Ig strand C 1590..1595 CDD:143220
Ig strand E 1613..1617 CDD:143220
Ig strand F 1626..1632 CDD:143220
Ig strand G 1641..1647 CDD:143220
Laminin_B 1748..1878 CDD:459652
EGF_Lam 1935..1989 CDD:238012
Laminin_B 2113..2249 CDD:459652
EGF_Lam <2250..2276 CDD:238012
EGF_Lam 2284..2333 CDD:238012
Laminin_EGF <2369..2399 CDD:395007
Laminin_B 2465..2599 CDD:459652
Ig_3 2688..2756 CDD:464046
Ig_3 2791..2861 CDD:464046
Ig_3 2890..2958 CDD:464046 19/73 (26%)
Ig 2987..3071 CDD:472250 23/107 (21%)
Ig strand B 3004..3008 CDD:409353 0/3 (0%)
Ig strand C 3017..3021 CDD:409353 1/3 (33%)
Ig strand E 3036..3040 CDD:409353 2/3 (67%)
Ig strand F 3050..3055 CDD:409353 2/4 (50%)
Ig strand G 3063..3066 CDD:409353 2/2 (100%)
I-set 3089..3162 CDD:400151 21/73 (29%)
Ig strand B 3094..3098 CDD:409353 1/3 (33%)
Ig strand C 3107..3111 CDD:409353 1/3 (33%)
Ig strand E 3128..3132 CDD:409353 1/3 (33%)
Ig strand F 3142..3147 CDD:409353 2/4 (50%)
Ig strand G 3155..3158 CDD:409353 1/2 (50%)
Ig 3165..3253 CDD:472250 21/99 (21%)
Ig strand B 3185..3189 CDD:409353 0/3 (0%)
Ig strand C 3198..3202 CDD:409353 0/3 (0%)
Ig strand E 3219..3223 CDD:409353 2/9 (22%)
Ig strand F 3233..3238 CDD:409353 2/4 (50%)
Ig strand G 3246..3249 CDD:409353 0/2 (0%)
Ig 3298..3355 CDD:472250 11/56 (20%)
Ig strand B 3301..3305 CDD:409353 0/3 (0%)
Ig strand C 3313..3316 CDD:409353 0/2 (0%)
Ig strand E 3333..3336 CDD:409353 0/2 (0%)
IG_like 3381..3457 CDD:214653 23/124 (19%)
Ig strand B 3390..3394 CDD:409353 1/5 (20%)
Ig strand C 3403..3407 CDD:409353 3/26 (12%)
Ig strand F 3437..3442 CDD:409353 1/4 (25%)
IG_like 3475..>3536 CDD:214653 9/64 (14%)
Ig strand B 3480..3484 CDD:409353 1/6 (17%)
Ig strand C 3491..3503 CDD:409353 0/11 (0%)
Ig strand E 3519..3523 CDD:409353 1/3 (33%)
Ig 3613..3675 CDD:472250
Ig strand B 3625..3629 CDD:409353
Ig strand C 3637..3642 CDD:409353
Ig strand E 3658..3662 CDD:409353
IG_like 3706..3772 CDD:214653
Ig strand B 3714..3718 CDD:409353
Ig strand C 3727..3731 CDD:409353
Ig strand E 3746..3750 CDD:409353
Ig strand F 3760..3765 CDD:409353
Ig strand G 3774..3777 CDD:409353
LamG 3794..3939 CDD:238058
EGF 3962..3994 CDD:394967
LamG 4042..4195 CDD:238058
EGF_CA 4254..4286 CDD:238011
LamG 4295..4448 CDD:238058
prtgXP_004912757.1 Ig 30..121 CDD:472250 22/94 (23%)
Ig strand B 47..51 CDD:409353 1/3 (33%)
Ig strand C 60..64 CDD:409353 0/3 (0%)
Ig strand E 82..86 CDD:409353 1/3 (33%)
Ig strand F 101..106 CDD:409353 2/4 (50%)
Ig strand G 115..118 CDD:409353 1/2 (50%)
Ig 128..214 CDD:472250 21/91 (23%)
Ig strand B 143..147 CDD:409353 0/3 (0%)
Ig strand C 156..160 CDD:409353 1/3 (33%)
Ig strand E 179..183 CDD:409353 2/3 (67%)
Ig strand F 193..198 CDD:409353 2/4 (50%)
Ig strand G 207..210 CDD:409353 1/2 (50%)
Ig_3 243..316 CDD:464046 24/77 (31%)
I-set 336..421 CDD:400151 19/91 (21%)
Ig strand B 353..357 CDD:409353 0/3 (0%)
Ig strand C 366..370 CDD:409353 0/3 (0%)
Ig strand E 387..391 CDD:409353 1/3 (33%)
Ig strand F 401..406 CDD:409353 2/4 (50%)
Ig strand G 414..417 CDD:409353 0/2 (0%)
FN3 428..521 CDD:238020 24/110 (22%)
FN3 529..619 CDD:238020 19/109 (17%)
FN3 628..708 CDD:238020 15/100 (15%)
FN3 <687..>925 CDD:442628 20/88 (23%)
FN3 829..920 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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