DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kn and ebf1a

DIOPT Version :9

Sequence 1:NP_001097317.1 Gene:kn / 45318 FlyBaseID:FBgn0001319 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_009289482.1 Gene:ebf1a / 565310 ZFINID:ZDB-GENE-081028-51 Length:606 Species:Danio rerio


Alignment Length:582 Identity:368/582 - (63%)
Similarity:413/582 - (70%) Gaps:101/582 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 MFGLPPTAAVDMNQPRGPMTSLKEEPLGS-----RWAMQ--PVVD-----QSNLGIGRAHFEKQP 206
            |||:.     |..|..|  :|:||||:|:     |..||  .|:|     ||.:|:.||||||||
Zfish     1 MFGIQ-----DSIQRSG--SSMKEEPIGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQP 58

  Fly   207 PSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQE 271
            |||||||||||||:|||||.|||:|||||:|:||:||:.||...||||||.|||||||:||.|.|
Zfish    59 PSNLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKESTGEKTNNGIHYRLQLLYSNGIRTE 123

  Fly   272 QDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFL 336
            ||.:||||||:||||||||||||||||||||||||:|||||||||||||||||||||||||||||
Zfish   124 QDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFL 188

  Fly   337 KFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGT 401
            ||||||||||||||||||||||||||:||.|:|||.:||:||||||||||||||||:|||.:|||
Zfish   189 KFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGT 253

  Fly   402 GNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGT 466
                         |.....|      .:||||||||||||||||||||||:||||||||||:|||
Zfish   254 -------------PSYLEHG------ESTPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGT 299

  Fly   467 MLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQK 531
            |||||||||.||||||||||||||||||||||||||||||:||||:| :||||||||||||||||
Zfish   300 MLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIY-TALNEPTIDYGFQRLQK 363

  Fly   532 LIPRHPGDPEKLQKEIILKRAADLVEALYSMPRS--------------------------PG--- 567
            :|||||||||:|.||:|||||||||||||.||.:                          ||   
Zfish   364 VIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRGHNQLPGLTN 428

  Fly   568 -----GSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATA 627
                 |..|.||:..||||:|.| |.|.....:.| .:|||||. ||..| :||..|  ||    
Zfish   429 SSVHSGMMGVNSFHSQLAVNVSD-STQAANQGFSR-NTSSVSPH-GYVPS-TTPQQS--SY---- 483

  Fly   628 ASAAVAATANGYAPAPNMGTLSSSP----GSVFNSTSRVSSLSFNPFAL-PTCNTQGYSTQL 684
              :.|:.:.|||..| .|.||..||    ||..||          |:|: |:..|...||.|
Zfish   484 --STVSTSMNGYGNA-GMTTLGGSPNFLNGSAANS----------PYAIVPSSPTMASSTSL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knNP_001097317.1 COE_DBD 184..395 CDD:212156 176/217 (81%)
IPT_COE 431..515 CDD:238580 78/83 (94%)
COE1_HLH 517..560 CDD:293032 38/42 (90%)
ebf1aXP_009289482.1 COE1_DBD 21..247 CDD:293031 178/225 (79%)
IPT_COE 264..348 CDD:238580 78/84 (93%)
COE1_HLH 349..392 CDD:293032 38/42 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595168
Domainoid 1 1.000 374 1.000 Domainoid score I834
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 648 1.000 Inparanoid score I781
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352969at33208
OrthoFinder 1 1.000 - - FOG0000764
OrthoInspector 1 1.000 - - otm25853
orthoMCL 1 0.900 - - OOG6_102533
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X577
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.800

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