DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kn and ebf3b

DIOPT Version :9

Sequence 1:NP_001097317.1 Gene:kn / 45318 FlyBaseID:FBgn0001319 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_009291258.1 Gene:ebf3b / 556476 ZFINID:ZDB-GENE-131126-3 Length:514 Species:Danio rerio


Alignment Length:561 Identity:307/561 - (54%)
Similarity:359/561 - (63%) Gaps:117/561 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 LKEEPLGS------RW--AMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIE 231
            :|:|..||      .|  ....:..|.::|:.|||||||||:|||||||||||:||||..||.:|
Zfish     1 MKQEVRGSSAGSAVSWLHTHSSLSTQRDVGLARAHFEKQPPANLRKSNFFHFVLALYDSQGQSVE 65

  Fly   232 IERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNP 296
            ||:|||:.|:|||.|..:.||||||.|:|||||.||.|.|||:::|||||||||||::|||||||
Zfish    66 IEQTAFVDFVEKDKEPVSEKTNNGIHYKLQLLYNNGVRTEQDLYIRLIDSVTKQAIVFEGQDKNP 130

  Fly   297 EMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQV 361
            ||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Zfish   131 EMCRVLLTHETMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDTRRFQV 195

  Fly   362 VISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPL 426
            ::||..:|...:||||||:||||||||||||:|.:..|                           
Zfish   196 LVSTTASVKAHILAISDNIFVHNNSKHGRRARRFELIE--------------------------- 233

  Fly   427 PVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGV 491
             ...|||||||||||||:|||:|||:||.||.||||||||||||||:||.|||||||||||||||
Zfish   234 -AEIPCIKAISPSEGWTSGGASVIIIGDQFFSGLQVVFGTMLVWSEVITPHAIRVQTPPRHIPGV 297

  Fly   492 VEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLV 556
            |||||||||||||:|:|||||| :||||||||||||||||:||.||||.|:|.||::|||||||:
Zfish   298 VEVTLSYKSKQFCRGAPGRFVY-TALNEPTIDYGFQRLQKVIPHHPGDVERLPKEVLLKRAADLI 361

  Fly   557 EALY----------------------SMPRSPG-----GSTGFNSYAGQLAVSVQDGSGQWTEDD 594
            |..|                      |:||:|.     |....|||.|||:::.     :.::.|
Zfish   362 ETFYGAPQNNQEIILKRASDIAEALNSIPRNPSHTNPHGMMAVNSYDGQLSLNT-----EVSQQD 421

  Fly   595 YQRAQSSSVSPRG--------------------GYCSSASTPHSSGGSYGATAASAAVAATANGY 639
            .:||..:..|..|                    |...|.|..|.||.:...|             
Zfish   422 AERASFNRSSNTGFIEGSTSQQSEFNNTNMCMNGLTHSHSNTHLSGHTQTHT------------- 473

  Fly   640 APAPNMGTLSSSPGSVFNSTSRVSSLSFNPFALPTCNTQGY 680
              .|.:...|.:...||...             ||.:||.|
Zfish   474 --RPAVPNFSMAATQVFKDN-------------PTVDTQHY 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knNP_001097317.1 COE_DBD 184..395 CDD:212156 160/212 (75%)
IPT_COE 431..515 CDD:238580 74/83 (89%)
COE1_HLH 517..560 CDD:293032 33/42 (79%)
ebf3bXP_009291258.1 COE1_DBD 7..229 CDD:293031 162/221 (73%)
IPT_COE 237..321 CDD:238580 74/84 (88%)
COE1_HLH 322..365 CDD:293032 33/42 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595167
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 648 1.000 Inparanoid score I781
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352969at33208
OrthoFinder 1 1.000 - - FOG0000764
OrthoInspector 1 1.000 - - otm25853
orthoMCL 1 0.900 - - OOG6_102533
Panther 1 1.100 - - LDO PTHR10747
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X577
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.900

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