DRSC/TRiP Functional Genomics Resources

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Protein Alignment kn and EBF3

DIOPT Version :9

Sequence 1:NP_001097317.1 Gene:kn / 45318 FlyBaseID:FBgn0001319 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_001362309.1 Gene:EBF3 / 253738 HGNCID:19087 Length:629 Species:Homo sapiens


Alignment Length:583 Identity:366/583 - (62%)
Similarity:412/583 - (70%) Gaps:100/583 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 MFGLPPTAAVDMNQPRGPMTSLKEEPLGSRWAMQP---------VVD-----QSNLGIGRAHFEK 204
            |||      :..|.|||. |::|||||||  .|.|         |||     ||.:|:.||||||
Human     1 MFG------IQENIPRGG-TTMKEEPLGS--GMNPVRSWMHTAGVVDANTAAQSGVGLARAHFEK 56

  Fly   205 QPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGAR 269
            |||||||||||||||:|||||.|||:|||||||:.|:||:.|.:..||||||.|:|||||:||.|
Human    57 QPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNNEKTNNGIHYKLQLLYSNGVR 121

  Fly   270 QEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRF 334
            .|||::||||||:|||||:||||||||||||||||||:|||||||||||||||||||||||||||
Human   122 TEQDLYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRF 186

  Fly   335 FLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTE 399
            ||||||||||||||||||||||||||||:||.|.|||.:||:||||||||||||||||:|||.:|
Human   187 FLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSE 251

  Fly   400 GTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVF 464
            ||            ||  :|      |..|||||||||||||||||||||||:||||||||||||
Human   252 GT------------AP--SY------LENATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVF 296

  Fly   465 GTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRL 529
            |||||||||||.||||||||||||||||||||||||||||||:|||||| :||||||||||||||
Human   297 GTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVY-TALNEPTIDYGFQRL 360

  Fly   530 QKLIPRHPGDPEKLQKEIILKRAADLVEALYSMP------------------------------- 563
            ||:|||||||||:|.||::||||||||||||.||                               
Human   361 QKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPTL 425

  Fly   564 -RSPG--GSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSG----- 620
             .:|.  |..|.||::.||||:|.:.|....:..|.| .:|||||| ||..| |||..|.     
Human   426 GNNPAHTGMMGVNSFSSQLAVNVSETSQANDQVGYSR-NTSSVSPR-GYVPS-STPQQSNYNTVS 487

  Fly   621 ---GSYGATA-ASAAVAAT---ANGYAPAPNMGTLSSSPGSVFNSTSRVSS-------LSFNP 669
               ..||:.| ||..|..:   .||.:.....|.:.|||....:|.:..|:       .||:|
Human   488 TSMNGYGSGAMASLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCSSTHGIFSFSP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knNP_001097317.1 COE_DBD 184..395 CDD:212156 174/224 (78%)
IPT_COE 431..515 CDD:238580 80/83 (96%)
COE1_HLH 517..560 CDD:293032 37/42 (88%)
EBF3NP_001362309.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 13/27 (48%)
COE1_DBD 21..247 CDD:406750 176/227 (78%)
Interaction with DNA. /evidence=ECO:0000250 63..66 2/2 (100%)
Interaction with DNA. /evidence=ECO:0000250 197..204 6/6 (100%)
Interaction with DNA. /evidence=ECO:0000250 236..239 2/2 (100%)
IPT_COE 263..347 CDD:238580 80/84 (95%)
COE1_HLH 348..391 CDD:406751 37/42 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..483 16/34 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159110
Domainoid 1 1.000 374 1.000 Domainoid score I884
eggNOG 1 0.900 - - E1_KOG3836
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56472
Inparanoid 1 1.050 649 1.000 Inparanoid score I795
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352969at33208
OrthoFinder 1 1.000 - - FOG0000764
OrthoInspector 1 1.000 - - otm41320
orthoMCL 1 0.900 - - OOG6_102533
Panther 1 1.100 - - LDO PTHR10747
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2885
SonicParanoid 1 1.000 - - X577
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.790

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