DRSC/TRiP Functional Genomics Resources

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Protein Alignment kn and Ebf4

DIOPT Version :9

Sequence 1:NP_001097317.1 Gene:kn / 45318 FlyBaseID:FBgn0001319 Length:689 Species:Drosophila melanogaster
Sequence 2:XP_030106297.1 Gene:Ebf4 / 228598 MGIID:2385972 Length:724 Species:Mus musculus


Alignment Length:648 Identity:364/648 - (56%)
Similarity:426/648 - (65%) Gaps:129/648 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LYPSAVSGP-----RSAGG-----------------LMFGLPP----------TAAVDMNQ---- 167
            |.|.|.:||     |..||                 |:..|||          |||...::    
Mouse    41 LPPGAAAGPGRRGTRGPGGGCVCWPGAGPAFPRDARLLLLLPPRPPPSPPPTSTAAASPSRMDAL 105

  Fly   168 PRGPMTSLKEEP-----LGS--RWAMQP--VVD-----QSNLGIGRAHFEKQPPSNLRKSNFFHF 218
            |||.: .|||||     |||  .| ||.  ::|     ||.:|:.||||||||||||||||||||
Mouse   106 PRGGL-HLKEEPLLPSSLGSVRSW-MQSAGILDSNTAAQSGVGLARAHFEKQPPSNLRKSNFFHF 168

  Fly   219 VIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVT 283
            |:|:|||.|||:|:||||||.|:|||.|....||||||.|||:|:|.||.|.|||::||||||::
Mouse   169 VLAMYDRQGQPVEVERTAFIDFVEKDREPGTEKTNNGIHYRLRLVYNNGLRTEQDLYVRLIDSMS 233

  Fly   284 KQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLK 348
            |||||||||||||||||||||||:|||||||:|||||||||||||||||||||||||||||||||
Mouse   234 KQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLK 298

  Fly   349 NAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPL 413
            ||||||||||||||:||.|:|||.:||:||||||||||||||||:|||.:||..:..        
Mouse   299 NAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGQDSQP-------- 355

  Fly   414 APDSTYDGLYPP-----------LPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTM 467
            :||....   ||           ||.||||||||||.||||||||||||:|||||||||||||.:
Mouse   356 SPDQLQS---PPWYSPLTWVLSCLPAATPCIKAISPGEGWTTGGATVIIIGDNFFDGLQVVFGNV 417

  Fly   468 LVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKL 532
            |:||||||.||||||||||||||||||||||||||||||:|||||| :||||||||||||||||:
Mouse   418 LLWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVY-TALNEPTIDYGFQRLQKV 481

  Fly   533 IPRHPGDPEKLQKEIILKRAADL----------------------VEALYSMPRSPG-------- 567
            |||||||||:|.||::|||||||                      .|||||.||:|.        
Mouse   482 IPRHPGDPERLPKEVLLKRAADLAEALYGVPSSNQELLLKRAADVAEALYSAPRAPAPLGPLAPS 546

  Fly   568 ----GSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGA--- 625
                ...|.|:::..||::|.|.:   .|..|.|: ..|.|||     .|.:|.|...|||:   
Mouse   547 HPHPAVVGINAFSSPLAIAVGDTT---PEPGYARS-CGSASPR-----FAPSPGSQQSSYGSGLG 602

  Fly   626 --TAASAAVAATANGYAPAPNM--GTLSSSPGSVFNST---SRVSSLSFNPFALPTCNTQGYS 681
              ..:..|...|..|...:|:.  |:.::||.::..|:   :..||:|. |.|.||.:...:|
Mouse   603 AGLGSYGAPGVTGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSL-PAAAPTTSVFSFS 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knNP_001097317.1 COE_DBD 184..395 CDD:212156 171/217 (79%)
IPT_COE 431..515 CDD:238580 76/83 (92%)
COE1_HLH 517..560 CDD:293032 36/64 (56%)
Ebf4XP_030106297.1 COE1_DBD 119..345 CDD:293031 174/226 (77%)
IPT_COE 381..465 CDD:238580 76/84 (90%)
COE1_HLH 466..509 CDD:318604 34/42 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849484
Domainoid 1 1.000 374 1.000 Domainoid score I868
eggNOG 1 0.900 - - E1_KOG3836
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 648 1.000 Inparanoid score I789
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352969at33208
OrthoFinder 1 1.000 - - FOG0000764
OrthoInspector 1 1.000 - - otm43377
orthoMCL 1 0.900 - - OOG6_102533
Panther 1 1.100 - - O PTHR10747
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X577
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

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