DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kn and unc-3

DIOPT Version :9

Sequence 1:NP_001097317.1 Gene:kn / 45318 FlyBaseID:FBgn0001319 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_510453.1 Gene:unc-3 / 181573 WormBaseID:WBGene00006743 Length:491 Species:Caenorhabditis elegans


Alignment Length:544 Identity:287/544 - (52%)
Similarity:355/544 - (65%) Gaps:79/544 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 AVSGPRSAGGLMFGLPPTAAVDMNQPRGPM------TSLKEEPLGSRWAMQPVVDQSNLG--IGR 199
            :::.|..||.:.|         .::|..|:      .|:|:|...|.|   |::|.||..  |.|
 Worm     2 SLTAPLRAGQMNF---------YDEPYNPVLNLHIQPSVKDENQRSTW---PIIDTSNTSTQIAR 54

  Fly   200 AHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLY 264
            |||||.||:|||||||||||||||||..||||:|||.|.||:||:.|.|...|.|||.|||.|::
 Worm    55 AHFEKHPPNNLRKSNFFHFVIALYDRNSQPIEVERTQFAGFVEKEKEVDGQDTRNGIHYRLSLMF 119

  Fly   265 ANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPV 329
            .||.|.|.|:|||||||.|||||.|||||||||||||||||||||||||:|||||||||||||||
 Worm   120 QNGIRSEHDLFVRLIDSSTKQAITYEGQDKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPV 184

  Fly   330 IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKR 394
            |||||||||||||||||||||||||||||||||:.:...:||||||:|||||||||||||||.||
 Worm   185 IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVLCSSARIDGPLLAVSDNMFVHNNSKHGRRTKR 249

  Fly   395 LDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDG 459
            .|.::                ||.|.. ...||.:.|.|||:.|||||..||..|:::|:|||:|
 Worm   250 TDASD----------------DSEYSE-SAELPSSVPVIKALFPSEGWIQGGTQVVLIGENFFEG 297

  Fly   460 LQVVFGTMLV-WSE---LITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEP 520
            |||.|||... |.|   ||:.|||||.|||:|..|.|:|||.||||.:.:|:|.||.|:: |.||
 Worm   298 LQVAFGTASPNWGESVQLISPHAIRVTTPPKHSAGPVDVTLQYKSKTYSRGTPLRFSYIT-LAEP 361

  Fly   521 TIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQD 585
            .|:|||||||||:|::|||||:|.|:.||||||:|.||||:...:...|:.:::...        
 Worm   362 GIEYGFQRLQKLLPKYPGDPERLPKDQILKRAAELAEALYNRTSTESLSSYYHTQFD-------- 418

  Fly   586 GSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSS 650
                 ...||  |..:..|||      ::.|:.:    |..|.|:||..|        :..|:::
 Worm   419 -----ATSDY--AARTHTSPR------STLPYGA----GPPALSSAVYQT--------SYPTVNA 458

  Fly   651 SPGSVFNSTSRVSSLSF---NPFA 671
            :|.:.|.:| :....:|   ||||
 Worm   459 TPAANFLNT-QTGFATFGAVNPFA 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
knNP_001097317.1 COE_DBD 184..395 CDD:212156 165/212 (78%)
IPT_COE 431..515 CDD:238580 50/87 (57%)
COE1_HLH 517..560 CDD:293032 30/42 (71%)
unc-3NP_510453.1 COE_DBD 45..249 CDD:212156 161/203 (79%)
IPT_COE 269..357 CDD:238580 50/87 (57%)
COE1_HLH 358..401 CDD:293032 30/42 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166698
Domainoid 1 1.000 347 1.000 Domainoid score I552
eggNOG 1 0.900 - - E1_KOG3836
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 511 1.000 Inparanoid score I710
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29193
OrthoDB 1 1.010 - - D352969at33208
OrthoFinder 1 1.000 - - FOG0000764
OrthoInspector 1 1.000 - - oto19456
orthoMCL 1 0.900 - - OOG6_102533
Panther 1 1.100 - - LDO PTHR10747
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2885
SonicParanoid 1 1.000 - - X577
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.840

Return to query results.
Submit another query.