DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz and fzd6

DIOPT Version :9

Sequence 1:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_956855.1 Gene:fzd6 / 393533 ZFINID:ZDB-GENE-040426-1451 Length:617 Species:Danio rerio


Alignment Length:540 Identity:210/540 - (38%)
Similarity:285/540 - (52%) Gaps:49/540 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LDGLPHHN--RCEPITISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCSDDLQLFL 106
            ||....|.  .|||:.:..|.::|||.|..||::.|..|:.|.:.:.:|.|||.:.||.|..|||
Zfish    13 LDSCVSHTLFTCEPVQVQWCLDMPYNTTFFPNMLEHYDQDIAAVRMKEFMPLVSVRCSPDAHLFL 77

  Fly   107 CSLYVPVCTILERP------IPPCRSLCESARV-CEKLMKTYNFNWPENLECSKFPVHGGEDLCV 164
            |..:||.|......      :.|||..||..|. |..:|.|::.:||..|:|.:....||     
Zfish    78 CQAFVPECRTHSHSQTHTHVLRPCRERCERVRSDCRAVMHTFDISWPSELQCERLESCGG----- 137

  Fly   165 AENTTSSASTAATPTRSVAKVTTRKHQTGVESPHRNIGFVCPVQLKTPLGMGYELKVGGKDL--H 227
                            |...||| ..::|..|..|::||.||:|||...|.      .|..|  .
Zfish   138 ----------------SAVDVTT-AGRSGAGSSPRDLGFWCPLQLKLRPGQ------SGSFLGAP 179

  Fly   228 DCGAPCHAMFFPERERTVLRYWVGSWAAVCVASCLFTVLTFLIDSSRFRYPERAIVFLAVCYLVV 292
            ||..||..||....|:.:.|.::|..:.||:.:.|||.||||:|:.|||||||.|||::|||..|
Zfish   180 DCAPPCENMFLTAAEQHLARLFIGVCSVVCLCATLFTFLTFLMDAQRFRYPERPIVFISVCYCAV 244

  Fly   293 GCAYVAGLGAGDSVSCREPFPPPVKLGRLQMMSTITQGHRQTTSCTVLFMALYFCCMAAFAWWSC 357
            ...|:.|...|.||:|..|       ||...:.|:..|.| :..|::||..||||..|...||..
Zfish   245 SLLYLLGFMLGPSVACGAP-------GRPGGVWTVVLGAR-SRGCSLLFTLLYFCSTAGMLWWVI 301

  Fly   358 LAFAWFLAAGLKWGHEAIENKSHLFHLVAWAVPALQTISVLALAKVEGDILSGVCFVGQLDTHSL 422
            |...||||||.||..|||:.::..||...|.|||:.|:.:|||.|||||.:|||||.|..|..:|
Zfish   302 LTITWFLAAGPKWSCEAIQKQALWFHAAGWGVPAVLTLLLLALGKVEGDGISGVCFTGLYDLTAL 366

  Fly   423 GAFLILPLCIYLSIGALFLLAGFISLFRIRTVMKTDGKRTDKLERLMLRIGFFSGLFILPAVGLL 487
            ..||:.||.:.:.:|...||||.::|.|:|.|::.|.....||:|.|:|||.||||::||.:.||
Zfish   367 RWFLVAPLALAVLLGLALLLAGIVALNRVRQVIQHDQLNQQKLKRFMIRIGVFSGLYLLPLLLLL 431

  Fly   488 GCLFYEYYNFDEWMIQWHRDICKPFSIPCPAARAPGSPEARPIFQIFMVKYLCSMLVGVTSSVWL 552
            ||..||......|...|....|:.|||||  ||........|...:|::|||.::.||:.:..|:
Zfish   432 GCYLYEMTQRRVWESSWVNRHCQEFSIPC--ARTSSGGVQHPGLSLFLLKYLMTLAVGIPAVFWV 494

  Fly   553 YSSKTMVSWRNFVERLQGKE 572
            .|.||...|.:|..|...|:
Zfish   495 SSRKTCSRWASFCRRAHKKD 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 42/124 (34%)
Frizzled 237..564 CDD:279827 140/326 (43%)
fzd6NP_956855.1 CRD_FZ6 20..154 CDD:143559 48/155 (31%)
7tm_GPCRs 188..508 CDD:391938 142/329 (43%)
TM helix 1 198..222 CDD:341315 10/23 (43%)
TM helix 2 231..252 CDD:341315 10/20 (50%)
TM helix 3 282..304 CDD:341315 10/21 (48%)
TM helix 4 325..341 CDD:341315 7/15 (47%)
TM helix 5 363..386 CDD:341315 6/22 (27%)
TM helix 6 414..439 CDD:341315 15/24 (63%)
TM helix 7 469..494 CDD:341315 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11309
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X126
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

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