DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz and szl

DIOPT Version :10

Sequence 1:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_858049.1 Gene:szl / 353294 ZFINID:ZDB-GENE-030530-1 Length:282 Species:Danio rerio


Alignment Length:292 Identity:76/292 - (26%)
Similarity:119/292 - (40%) Gaps:85/292 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RCEPI--TISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCSDDLQLFLCSLYVPVC 114
            ||.||  .:|:|:::||:...:|||:||...|||.........|:..||....:.|:|||..|||
Zfish    26 RCVPIPPQMSVCQDVPYSEMRLPNLLGHGSLEEAAPRSDDLRTLLHTGCHPQARAFVCSLIAPVC 90

  Fly   115 TILERPIPPCRSLCESAR-VCEKLMKTYNFNWPENLECSKFPVHGGEDLCVAENTTSSASTAATP 178
              |:|.|.||||:|.:.: .|..::..:..:|||:|.|.:||   .:|.|:            ||
Zfish    91 --LDRFIQPCRSVCLAVKESCSPVLACHGHSWPESLNCERFP---EQDDCL------------TP 138

  Fly   179 -TRSVAKVTTRKHQTGVESPHRNIGFVCP-VQ----LKTPLGM----GYELKV------------ 221
             .:.::..:....|...:|        || ||    |||.|..    .:.:||            
Zfish   139 LPKHISAFSKEFPQPACQS--------CPSVQESPSLKTLLDSLCLNDFAVKVKIMRRRVPSSEP 195

  Fly   222 -----GGKDLHDCGAPCHAMFFPERERTVLRYWVGSWAAVCVASCLFTVLTFLIDSSRFRYPERA 281
                 |..:|.:.|.     ..|....::|:.|:     :....|...::.          |.||
Zfish   196 EFTVEGAVELIERGP-----LMPYDTASLLQRWM-----LINLRCAHALVR----------PGRA 240

  Fly   282 IVFLAVCYLVVGCAYVAGLGAGDSVSCREPFP 313
            .:     ||:.|     .:.||.|:.....||
Zfish   241 QL-----YLITG-----KMRAGGSIEIANLFP 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 44/117 (38%)
7tmF_FZD1_insect 236..568 CDD:320376 15/78 (19%)
TM helix 1 245..270 CDD:320376 3/24 (13%)
TM helix 2 279..300 CDD:320376 5/20 (25%)
TM helix 3 338..364 CDD:320376
TM helix 4 381..397 CDD:320376
TM helix 5 419..448 CDD:320376
TM helix 6 468..495 CDD:320376
TM helix 7 527..552 CDD:320376
szlNP_858049.1 CRD_FZ 19..158 CDD:470581 48/156 (31%)
NTR_Sfrp1_like 152..282 CDD:239635 30/149 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.