DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz and Smo

DIOPT Version :9

Sequence 1:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_036939.1 Gene:Smo / 25273 RGDID:3726 Length:793 Species:Rattus norvegicus


Alignment Length:592 Identity:159/592 - (26%)
Similarity:253/592 - (42%) Gaps:113/592 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PYYRSGGGLMASSGTELDGLP----HHNR---CEPITISIC--KNIPYNMTIMPNLIGHTKQEEA 83
            |..||.||....:.......|    |..|   |||:..::|  ..:||..|..........||||
  Rat    42 PGPRSAGGSARRNAPVTSPPPPLLSHCGRAAHCEPLRYNVCLGSALPYGATTTLLAGDSDSQEEA 106

  Fly    84 GLEVHQFAPLVKI-GCSDDLQLFLCSLYVPVCTILERPIPPCRSLCESAR----VCEKLMKTYNF 143
            ..::..::.|... .|...:|..||::|:|.|. .:|...|.|:||::.|    :.|:     ..
  Rat   107 HSKLVLWSGLRNAPRCWAVIQPLLCAVYMPKCE-NDRVELPSRTLCQATRGPCAIVER-----ER 165

  Fly   144 NWPENLECSKFPVHGGEDLCVAENTTSSASTAATPTRSVAKVTTRKHQTGVESPHRNIGFVCPVQ 208
            .||:.|.|:  |.|..|                                |..:..:||.|....|
  Rat   166 GWPDFLRCT--PDHFPE--------------------------------GCPNEVQNIKFNSSGQ 196

  Fly   209 LKTPLGMGYELKVGGKDLHDCGAPCHAMFFPERERTVLRYWVGSWAAVCVASCLFTVLTFLID-S 272
            .:.||......|...:|:..||..|....|.|.|...:..::.::.||.....|||:.||:.| .
  Rat   197 CEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWR 261

  Fly   273 SRFRYPERAIVFLAVCYLVVGCAYVAGL--GAGDSVSCREP----FPPPVKLGRLQMMSTITQGH 331
            :..|||...:.::..|:.|....::|..  ||...:.||..    |..|..              
  Rat   262 NSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRFGEPTS-------------- 312

  Fly   332 RQTTSCTVLFMALYFCCMAAFAWWSCLAFAW---FLAAGLKWGHEAIENKSHLFHLVAWAVPALQ 393
            .:|.||.::|:.:|:..||...|:..|.:||   |.|.|..  ::.:..|:..|||:.|::|.:.
  Rat   313 SETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTT--YQPLSGKTSYFHLLTWSLPFVL 375

  Fly   394 TISVLALAKVEGDILSGVCFVGQLDTHSLGAFLILPLCIYLSIGALFLLAGFISLFRIRTVMKTD 458
            |:::||:|:|:||.:||:||||..:......|::.|:.:.|.:|..||:.|.::||.|::  ...
  Rat   376 TVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKS--NHP 438

  Fly   459 G----KRTDKLERLMLRIGFFSGL---FILPAVGLLGCLFYEYYNFDEWMIQWHRDICKPFSIPC 516
            |    |...|:...|||:|.|..|   |:|..   ..|.||:::|..||...: ||.     :.|
  Rat   439 GLLSEKAASKINETMLRLGIFGFLAFGFVLIT---FSCHFYDFFNQAEWERSF-RDY-----VLC 494

  Fly   517 PAARAPGSPEARPIFQIFMVKYLCSMLV-----------GVTSSVWLYSSKTMVSWRNFVERLQG 570
            .|....|.|..:||... .:|...|:||           |:..|.|:::..|::.||....||.|
  Rat   495 QANVTIGLPTKKPIPDC-EIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLTG 558

  Fly   571 ---KEPR 574
               .||:
  Rat   559 HSDDEPK 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 34/125 (27%)
Frizzled 237..564 CDD:279827 101/354 (29%)
SmoNP_036939.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..61 5/18 (28%)
CRD_SMO 70..200 CDD:143560 39/169 (23%)
Frizzled 225..554 CDD:279827 101/356 (28%)
Interaction with BBS5 and BBS7. /evidence=ECO:0000250|UniProtKB:P56726 542..573 8/24 (33%)
Interaction with DLG5. /evidence=ECO:0000250|UniProtKB:P56726 585..597
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 674..702
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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