DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz and lin-17

DIOPT Version :9

Sequence 1:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001021813.1 Gene:lin-17 / 171832 WormBaseID:WBGene00003006 Length:558 Species:Caenorhabditis elegans


Alignment Length:589 Identity:183/589 - (31%)
Similarity:273/589 - (46%) Gaps:97/589 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RCEPITISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCSDDLQLFLCSLYVPVCTI 116
            :|.||.|.:||::|||.|..||.|.|..|.........|.||:|..|...:..|:||::.|:|.|
 Worm    27 KCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKCHPHIHFFICSVFAPMCPI 91

  Fly   117 -LERPIPPCRSLCESARV-CEKLMKTYNFNWPENLECSKFPVHGGEDLCV---AENTTSSASTAA 176
             :.:.:..|:|:||..:. |..:::.:...|||.|.|::||  ...:||:   .:..|...|...
 Worm    92 GMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLNCAQFP--DPPELCMKPTEDEITGGFSAPR 154

  Fly   177 TPTRSVAKVTTRKHQTGVESPHRNIGFVCPVQLKTPLGMGYELKVGGKDLHD----CGAPC--HA 235
            .||:..:..:::  .||           ||..|.            ..|.||    |...|  :.
 Worm   155 LPTKGSSSSSSK--PTG-----------CPSDLV------------DVDPHDPKSHCAFACQSNV 194

  Fly   236 MFFPERERTVLRYWVGSWAAVCVASCLFTVLTFLIDSSRFRYPERAIVFLAVCYLVVGCAYVAGL 300
            ||..:.:|.| |.|...:||......||:.|||.||..|||:|||.:.:|::|..:....|:..|
 Worm   195 MFSTDNKRMV-RSWSIWFAAANAGVALFSFLTFAIDRKRFRFPERCVFYLSLCIFISSLPYLTPL 258

  Fly   301 GAGDSV-SCREPFPPPVKLGRLQMMSTITQGHRQTTSCTVLFMALYFCCMAAFAWWSCLAFAWFL 364
            .....: ||.       .||..:  |.::.|....:.|...|:..||...||..||...:|..:|
 Worm   259 FIDAPIRSCH-------ALGNGR--SYLSIGTFDNSYCLASFLLNYFFSTAAALWWLMFSFTLYL 314

  Fly   365 AAGLKWGHEAIENKSHLFHLVAWAVPALQTISVLALAKVEGDILSGVCFVGQLDTHSLGAFLILP 429
            :.|.||..|.||..|...|.|||.:.:|.||.||...||:...|:.:|.||.|::.:|..|:|:|
 Worm   315 SGGRKWVPEGIEACSSYVHFVAWGLSSLATIIVLIFNKVDASELTALCSVGNLNSIALLWFVIVP 379

  Fly   430 LCIYLSIGALFLLAGFISLFRIRTVMKTDGKRTDKLERLMLRIGFFSGLFILPAVGLLGCLFYEY 494
            ..|.:.||..|::.||.|:.|.|...:|.|..|.|||:||:::|||..|||||.|..|.|..|::
 Worm   380 RTICIVIGTCFIVGGFASMCRERISFRTRGTDTSKLEKLMVKMGFFCALFILPNVIELVCQCYKF 444

  Fly   495 YNFDEWMI--QWHRDICKPFSIPCP----AARAPGSPEARPIFQIFMVKYLCSMLVGVTSSVWLY 553
                  ||  ||.|     .:|.|.    |...|..|:|    :|:|...:.|:..|.:..:|:.
 Worm   445 ------MILTQWTR-----MTIDCKQQSGACHRPTPPQA----EIYMTAVISSLATGFSCLMWVL 494

  Fly   554 SSKTMVSWRNFVERLQGK----------EPRTRAQAYVXYETGPAGGAKSTPLTPDPEAANESYL 608
            |:||:.:|:||:  ..|.          ||.||.             ....|..|.|:.  ..|:
 Worm   495 SAKTVHAWKNFI--FCGMCSSAPVKNPIEPSTRP-------------LLEPPTAPPPQP--PVYM 542

  Fly   609 EFST 612
            :.:|
 Worm   543 QMAT 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 40/119 (34%)
Frizzled 237..564 CDD:279827 116/333 (35%)
lin-17NP_001021813.1 CRD_LIN_17 25..144 CDD:143563 40/118 (34%)
Frizzled 195..506 CDD:279827 118/335 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167933at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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