DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz and fzd4

DIOPT Version :10

Sequence 1:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_002936589.1 Gene:fzd4 / 100497693 XenbaseID:XB-GENE-478210 Length:523 Species:Xenopus tropicalis


Alignment Length:560 Identity:214/560 - (38%)
Similarity:303/560 - (54%) Gaps:88/560 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLMASSGTELDGLPHHNRCEPITISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCS 99
            |.:|..|.|     ...||:||.||:|:|:.||:|.||||:||..|.:|.|::..|.||::.|||
 Frog    18 GHIAGFGDE-----EERRCDPIRISMCQNLGYNVTKMPNLVGHELQADAELQLTTFTPLIQYGCS 77

  Fly   100 DDLQLFLCSLYVPVCT-ILERPIPPCRSLCESA-RVCEKLMKTYNFNWPENLECSKFPVHGGED- 161
            ..||.||||:|||:|| .:..||.||..:|.|. |.||.::|.:.|.|||:|.|||||.....: 
 Frog    78 SQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCEPVLKEFGFAWPESLNCSKFPPQNDHNH 142

  Fly   162 LCVAENTTSSASTAATPTRSVAKVTTRKHQTGVESPHRNIGFVCPVQLKTPLGMGYELKVGG--- 223
            :|                              :|.|..:   ..||..|||:..|.:....|   
 Frog   143 MC------------------------------MEGPGDD---EVPVHSKTPVLPGEDCNSFGPNS 174

  Fly   224 ------KDLHDCGAPC--HAMFFPERERTVLRYWVGSWAAVCVASCLFTVLTFLIDSSRFRYPER 280
                  |...:|...|  .:..:....:.....|:..||::|..|..|||||||||||||.||||
 Frog   175 DQYTWVKRSMNCVLKCGYDSGLYSRLSKEFTDIWMAVWASLCFISTAFTVLTFLIDSSRFCYPER 239

  Fly   281 AIVFLAVCYLVVGCAYVAGLGAG-DSVSCR-EPFPPPVKLGRLQMMSTITQGHRQTTSCTVLFMA 343
            .|:||::||.:...||:..|..| :.:||. |....||          :.|...:.|.|.::|:.
 Frog   240 PIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEPV----------LIQEGLKNTGCAIIFLL 294

  Fly   344 LYFCCMAAFAWWSCLAFAWFLAAGLKWGHEAIENKSHLFHLVAWAVPALQTISVLALAKVEGDIL 408
            :||..||:..||..|...|||||||||||||||..|..||:.|||:||::||.:|.:..|:.|.|
 Frog   295 MYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVDADEL 359

  Fly   409 SGVCFVGQLDTHSLGAFLILPLCIYLSIGALFLLAGFISLFRIRTVMKTDGKRTDKLERLMLRIG 473
            :|:|:||..:..:|..|::.||..||.||.||:.||.::||:||:.::.||.:||||||||::||
 Frog   360 TGLCYVGNQNIDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDGTKTDKLERLMVKIG 424

  Fly   474 FFSGLFILPAVGLLGCLFYEYYNFDEWMIQWHRDICKPFSIPCPAARAPGSPEARPIFQIFMVKY 538
            .||.|:.:||..::.|.|||..|::.:..                 .|..|..|..:..|||   
 Frog   425 VFSVLYTVPATCVIACYFYEISNWNVFRY-----------------TADDSNMAVEMLNIFM--- 469

  Fly   539 LCSMLVGVTSSVWLYSSKTMVSWRNFVERL--QGKEPRTR 576
              |:|||:||.:|::|:||:.:|:....||  .||..|.:
 Frog   470 --SLLVGITSGMWIWSAKTLHTWQKCTNRLVNSGKVKRKK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 58/118 (49%)
7tmF_FZD1_insect 236..568 CDD:320376 135/333 (41%)
TM helix 1 245..270 CDD:320376 11/24 (46%)
TM helix 2 279..300 CDD:320376 9/20 (45%)
TM helix 3 338..364 CDD:320376 9/25 (36%)
TM helix 4 381..397 CDD:320376 9/15 (60%)
TM helix 5 419..448 CDD:320376 12/28 (43%)
TM helix 6 468..495 CDD:320376 13/26 (50%)
TM helix 7 527..552 CDD:320376 10/24 (42%)
fzd4XP_002936589.1 CRD_FZ4 28..153 CDD:143557 60/157 (38%)
7tmF_FZD4 195..495 CDD:320166 135/331 (41%)
TM helix 1 204..229 CDD:320166 11/24 (46%)
TM helix 2 238..259 CDD:320166 9/20 (45%)
TM helix 3 289..315 CDD:320166 9/25 (36%)
TM helix 4 332..348 CDD:320166 9/15 (60%)
TM helix 5 370..399 CDD:320166 12/28 (43%)
TM helix 6 419..446 CDD:320166 13/26 (50%)
TM helix 7 456..481 CDD:320166 11/29 (38%)

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