DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz and fzd4

DIOPT Version :9

Sequence 1:NP_001261836.1 Gene:fz / 45307 FlyBaseID:FBgn0001085 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_002936589.1 Gene:fzd4 / 100497693 XenbaseID:XB-GENE-478210 Length:523 Species:Xenopus tropicalis


Alignment Length:560 Identity:214/560 - (38%)
Similarity:303/560 - (54%) Gaps:88/560 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLMASSGTELDGLPHHNRCEPITISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCS 99
            |.:|..|.|     ...||:||.||:|:|:.||:|.||||:||..|.:|.|::..|.||::.|||
 Frog    18 GHIAGFGDE-----EERRCDPIRISMCQNLGYNVTKMPNLVGHELQADAELQLTTFTPLIQYGCS 77

  Fly   100 DDLQLFLCSLYVPVCT-ILERPIPPCRSLCESA-RVCEKLMKTYNFNWPENLECSKFPVHGGED- 161
            ..||.||||:|||:|| .:..||.||..:|.|. |.||.::|.:.|.|||:|.|||||.....: 
 Frog    78 SQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCEPVLKEFGFAWPESLNCSKFPPQNDHNH 142

  Fly   162 LCVAENTTSSASTAATPTRSVAKVTTRKHQTGVESPHRNIGFVCPVQLKTPLGMGYELKVGG--- 223
            :|                              :|.|..:   ..||..|||:..|.:....|   
 Frog   143 MC------------------------------MEGPGDD---EVPVHSKTPVLPGEDCNSFGPNS 174

  Fly   224 ------KDLHDCGAPC--HAMFFPERERTVLRYWVGSWAAVCVASCLFTVLTFLIDSSRFRYPER 280
                  |...:|...|  .:..:....:.....|:..||::|..|..|||||||||||||.||||
 Frog   175 DQYTWVKRSMNCVLKCGYDSGLYSRLSKEFTDIWMAVWASLCFISTAFTVLTFLIDSSRFCYPER 239

  Fly   281 AIVFLAVCYLVVGCAYVAGLGAG-DSVSCR-EPFPPPVKLGRLQMMSTITQGHRQTTSCTVLFMA 343
            .|:||::||.:...||:..|..| :.:||. |....||          :.|...:.|.|.::|:.
 Frog   240 PIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEPV----------LIQEGLKNTGCAIIFLL 294

  Fly   344 LYFCCMAAFAWWSCLAFAWFLAAGLKWGHEAIENKSHLFHLVAWAVPALQTISVLALAKVEGDIL 408
            :||..||:..||..|...|||||||||||||||..|..||:.|||:||::||.:|.:..|:.|.|
 Frog   295 MYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVDADEL 359

  Fly   409 SGVCFVGQLDTHSLGAFLILPLCIYLSIGALFLLAGFISLFRIRTVMKTDGKRTDKLERLMLRIG 473
            :|:|:||..:..:|..|::.||..||.||.||:.||.::||:||:.::.||.:||||||||::||
 Frog   360 TGLCYVGNQNIDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQKDGTKTDKLERLMVKIG 424

  Fly   474 FFSGLFILPAVGLLGCLFYEYYNFDEWMIQWHRDICKPFSIPCPAARAPGSPEARPIFQIFMVKY 538
            .||.|:.:||..::.|.|||..|::.:..                 .|..|..|..:..|||   
 Frog   425 VFSVLYTVPATCVIACYFYEISNWNVFRY-----------------TADDSNMAVEMLNIFM--- 469

  Fly   539 LCSMLVGVTSSVWLYSSKTMVSWRNFVERL--QGKEPRTR 576
              |:|||:||.:|::|:||:.:|:....||  .||..|.:
 Frog   470 --SLLVGITSGMWIWSAKTLHTWQKCTNRLVNSGKVKRKK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzNP_001261836.1 CRD_FZ1_like 51..167 CDD:143567 58/118 (49%)
Frizzled 237..564 CDD:279827 135/328 (41%)
fzd4XP_002936589.1 CRD_FZ4 28..153 CDD:143557 60/157 (38%)
7tmF_FZD4 195..495 CDD:320166 135/331 (41%)
TM helix 1 204..229 CDD:320166 11/24 (46%)
TM helix 2 238..259 CDD:320166 9/20 (45%)
TM helix 3 289..315 CDD:320166 9/25 (36%)
TM helix 4 332..348 CDD:320166 9/15 (60%)
TM helix 5 370..399 CDD:320166 12/28 (43%)
TM helix 6 419..446 CDD:320166 13/26 (50%)
TM helix 7 456..481 CDD:320166 11/29 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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