DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and hmx4

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001038836.2 Gene:hmx4 / 751654 ZFINID:ZDB-GENE-060825-142 Length:238 Species:Danio rerio


Alignment Length:98 Identity:44/98 - (44%)
Similarity:61/98 - (62%) Gaps:4/98 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 DANEPPRIKCNLRKHK--PNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVK 466
            |:.:..:.|.|.:|:|  ..:|.||.|:.:|:..||..|..|:|||.||||..::||:|||||||
Zfish    93 DSCDDAQQKNNGKKNKLMTKKKTRTIFSKRQIFQLESTFDMKRYLSSAERACLANSLQLTETQVK 157

  Fly   467 IWFQNRRAKAKRLQEAEIE--KIKMAALGRGAP 497
            |||||||.|.||....|:|  ..:...:|:..|
Zfish   158 IWFQNRRNKLKRQLSTELEGPNSEFGDIGKTVP 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649 33/55 (60%)
hmx4NP_001038836.2 Homeodomain 115..169 CDD:459649 32/53 (60%)

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