DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and NKX6-1

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_006159.2 Gene:NKX6-1 / 4825 HGNCID:7839 Length:367 Species:Homo sapiens


Alignment Length:394 Identity:104/394 - (26%)
Similarity:152/394 - (38%) Gaps:117/394 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 PPAHHLHKTTSRLSNFSVASLLADTRPRT-PPNQAADGPQNLTSSAATSPISQASSTPPPPPASA 182
            ||...||         |:|.:.....|.. ||..|  ||.:.:||      |.:||:|.|     
Human    20 PPLAALH---------SMAEMKTPLYPAAYPPLPA--GPPSSSSS------SSSSSSPSP----- 62

  Fly   183 AAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQADARANSPPASTSSTPSS 247
                |..|.:|..:..     .|....::..:..|.::|..........:|.:.|.||.::.||:
Human    63 ----PLGTHNPGGLKP-----PATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSA 118

  Fly   248 TPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADHDEEEDSIVDIEDMNADD 312
            :|.||:..|..:.:::.|.....:...:..                                |..
Human   119 SPSGSSSSSSSSASASSASAAAAAAAAAAA--------------------------------AAS 151

  Fly   313 SPRSTPDGLDGSGKSLESPHGPPPGSHMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGG 377
            ||.....||...  |..||..||||.:     .||:|.|...|...|.|.:.|.          |
Human   152 SPAGLLAGLPRF--SSLSPPPPPPGLY-----FSPSAAAVAAVGRYPKPLAELP----------G 199

  Fly   378 GVP--WPGTRQMPPFGPPGMFPGAGFGGDANEPPRIKCN-------LRKHKPNRKPRTPFTTQQL 433
            ..|  |||..|.||:            .||    |:.|.       |.|....:..|..|:.||:
Human   200 RTPIFWPGVMQSPPW------------RDA----RLACTPHQGSILLDKDGKRKHTRPTFSGQQI 248

  Fly   434 LSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAK-----------AKRLQEAEIEKI 487
            .:|||.|.:.:||:..|||..:.||.:||:|||:||||||.|           ||:.|::|.|::
Human   249 FALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSETERL 313

  Fly   488 KMAA 491
            |.|:
Human   314 KGAS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 27/63 (43%)
NKX6-1NP_006159.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..133 29/118 (25%)
Repressor domain. /evidence=ECO:0000250 102..268 57/230 (25%)
Homeobox 239..293 CDD:395001 27/53 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..367 7/24 (29%)
Involved in DNA-binding. /evidence=ECO:0000250 306..367 5/12 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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