Protein Alignment Dr and ro

DIOPT Version :10

• Sequence 1: NP_477324.1
• Gene: Dr / 45285
• FlyBaseID: FBgn0000492
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 348
• Identity: 88/348 - (25%)
• Similarity: 125/348 - (35%)
• Gaps: 118/348 - (33%)

  Fly   154 DGPQNLTSSAATSPISQAS--STPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQH 216
            ||...:..|.:..||:..:  |.|..|.:      |...|...    :.||
  Fly    12 DGSPGIKRSDSLDPIANTTILSVPQRPSS------PRQFFERL----YGHL-------------- 52

  Fly   217 QAMAAQLRQQQQ---QADARANSPPASTSSTPSSTPLGSALGSQGNVASTP---AKNERHS---- 271
                 :.|..:.   .....|:.||      |..||    ..|.|...|:|   ..:||.|
  Fly    53 -----ETRSSENGEIDVGTHAHKPP------PCDTP----YHSDGGSVSSPDISISDERTSLAAY 102

  Fly   272 PLGSHTDSELEYDEEMLQDHEADHDEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPP 336
            |.........:|.:...|.|:..|...                                 |.||.
  Fly   103 PAYDFYGHAKDYPQHPSQQHQQHHHHH---------------------------------HHPPQ 134

  Fly   337 GSHMQSTILS-PAALASGHV--PIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPGMFPG 398
            ..|.:.:.:| |.|:|:|..  |:.|..|.|             |.|     ..|.|       .
  Fly   135 LVHQKLSYVSPPPAIAAGGAANPVLPHAFPA-------------GFP-----SDPHF-------S 174

  Fly   399 AGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTET 463
            |||..      .:....||....|:.||.|:|:|.|.||.:|...:|:|.:.|.|.:.:||||||
  Fly   175 AGFSA------FLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTET 233

  Fly   464 QVKIWFQNRRAKAKRLQEAEIEK 486
            |:||||||||||.||:::|:|::
  Fly   234 QIKIWFQNRRAKDKRIEKAQIDQ 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dr	NP_477324.1	Homeodomain	422..478	CDD:459649	31/55 (56%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	29/51 (57%)