DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dr and lab

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:606 Identity:139/606 - (22%)
Similarity:211/606 - (34%) Gaps:203/606 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PSSNTPAGNLIITSSSSNSGS-------------------------------NSGSNMSSGNMTS 58
            |.:|...|....|:|::|:.|                               |...:.|.||...
  Fly    17 PHANAYDGYSTTTASAANASSYFAPQQHQPHLQLQQQQQHQHLQQPQQHLTYNGYESSSPGNYYP 81

  Fly    59 SNLTNLSPSHPAGLNALASPTSPSALLLAHQQHLLQQHQQHQQQQQQQQQAAALQLAAVHPPAHH 123
            .....|:|          .|||      :||  ::|||||.||.||||          ::|   |
  Fly    82 QQQAQLTP----------PPTS------SHQ--VVQQHQQQQQAQQQQ----------LYP---H 115

  Fly   124 LHKTTSRLSNFSVASLLADTRPRTPPNQAADGP----------QNLTSSAATSPISQASSTPPPP 178
            .|..:...:.:.:.:......|.||.:.::..|          .:..::||.:.::..|::.|..
  Fly   116 SHLFSPSAAEYGITTSTTTGNPGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAPPSNSSPIT 180

  Fly   179 PASAAAQVPANT-----------------------FHPAAVAH-------------HAHLLQAAH 207
            .|:|:|  .:||                       .:|.|.|.             :|.:|.|::
  Fly   181 AANASA--TSNTQQQQQQAAIISSENGMMYTNLDCMYPTAQAQAPVHGYAGQIEEKYAAVLHASY 243

  Fly   208 AAAAAHAQHQAMAAQLRQQQ----QQADARANSPPASTS-STPSSTPLGSALGSQGNVASTPAKN 267
            |..........|..|..|.|    ||..|.:.:..|..| ...:....|...|..||:|:.|.:.
  Fly   244 APGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLANNPHQQ 308

  Fly   268 ERHSPLGSHTDSELEYDEEMLQDHE-----------ADHDEEEDSIVDIEDMNADDSPRSTPDGL 321
            :.            :..::..|.|:           |.....::|:.....||     |....|:
  Fly   309 QP------------QVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMN-----RQQRGGV 356

  Fly   322 DGSGKSLESPHGPPPGSHMQSTILSPAALASGHVPIR---------PTPFS-ALAAAAVA----- 371
            ...|.|..|......|:|..|| .|.:...|..:|..         |.|.: .|.|:.:|     
  Fly   357 ISPGSSTSSSTSASNGAHPAST-QSKSPNHSSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDY 420

  Fly   372 ---------------WTGMGGGVPWPGTRQMPPFG----------------------PPGMFPGA 399
                           .:|:|.|....|....|..|                      |.||..|.
  Fly   421 QMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGL 485

  Fly   400 GFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQ 464
            |.|...:     .|:|..: .|...||.||.:||..|||:|...:||:.|.|.|.:::|:|.|||
  Fly   486 GSGSGLS-----SCSLSSN-TNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQ 544

  Fly   465 VKIWFQNRRAK-AKRLQEAEI 484
            |||||||||.| .||::|..|
  Fly   545 VKIWFQNRRMKQKKRVKEGLI 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 30/53 (57%)
labNP_476613.1 Homeobox 505..557 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I4021
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.060

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