Protein Alignment Dr and cdx1a

DIOPT Version :9

• Sequence 1: NP_477324.1
• Gene: Dr / 45285
• FlyBaseID: FBgn0000492
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 197
• Identity: 52/197 - (26%)
• Similarity: 87/197 - (44%)
• Gaps: 49/197 - (24%)

  Fly   336 PGSHMQSTILSPAALASGHVPIRPT-PF-------------SALAAAAVAWT---GMGGGVPWP- 382
            |..|:.        |:..|:.:.|: |:             :.|.....:|:   |.|....||
Zfish    15 PARHLN--------LSQPHLNVYPSAPYPDYSGYHPGPALGNDLHHTGSSWSPGFGPGSRDDWPP 71

  Fly   383 ----GT-RQMP---------PFGPPGMFPGAGFGGDANEPPR-IKCNLRKHKPNRKPRTP----- 427
                || ..:|         |....|:..||..  |..||.. ::.:.....|..|.||.
Zfish    72 LYGHGTGHSLPANGVEVSVLPSVDQGLLSGAPV--DREEPQDWMRRSAVPTNPGGKTRTKDKYRV 134

  Fly   428 -FTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKIKMAA 491
             ::..|.|.|||:|...:|::|..:||.:.:|.|:|.||||||||||||.:::.:..:::::.::
Zfish   135 VYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRAKERKMNKKRLQQVQQSS 199

  Fly   492 LG 493
            .|
Zfish   200 SG 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dr	NP_477324.1	Homeobox	424..477	CDD:278475	27/58 (47%)
cdx1a	NP_998001.2	Caudal_act	11..115	CDD:282574	22/109 (20%)
		COG5576	<122..227	CDD:227863	30/80 (38%)
		Homeobox	133..185	CDD:278475	25/51 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910