DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and vax1

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_919391.2 Gene:vax1 / 373870 ZFINID:ZDB-GENE-030904-9 Length:317 Species:Danio rerio


Alignment Length:149 Identity:48/149 - (32%)
Similarity:67/149 - (44%) Gaps:37/149 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 QMPPFGPPGMFPGA----GFGGDANEPPRI-----KCNLRK---------HKPNRKPRTPFTTQQ 432
            |...|.|.|.....    ...||.:...||     |.::|:         .:|.| .||.||.:|
Zfish    40 QQESFSPSGAVENCEKSRASSGDPDYCRRILVRDAKGSIREIILPKGLDLDRPKR-TRTSFTAEQ 103

  Fly   433 LLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQ--EAEIEKI-------- 487
            |..||.:|:..||:...||.|.:..|.|:|||||:||||||.|.|:.|  ::|:..:        
Zfish   104 LYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATC 168

  Fly   488 ---KMAALGR-----GAPG 498
               ::...||     |.||
Zfish   169 SVLRLLEQGRLLTPPGLPG 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649 29/55 (53%)
vax1NP_919391.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 4/21 (19%)
Homeodomain 93..149 CDD:459649 29/56 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..248
Blue background indicates that the domain is not in the aligned region.

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