DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and vax1

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_919391.2 Gene:vax1 / 373870 ZFINID:ZDB-GENE-030904-9 Length:317 Species:Danio rerio


Alignment Length:149 Identity:48/149 - (32%)
Similarity:67/149 - (44%) Gaps:37/149 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 QMPPFGPPGMFPGA----GFGGDANEPPRI-----KCNLRK---------HKPNRKPRTPFTTQQ 432
            |...|.|.|.....    ...||.:...||     |.::|:         .:|.| .||.||.:|
Zfish    40 QQESFSPSGAVENCEKSRASSGDPDYCRRILVRDAKGSIREIILPKGLDLDRPKR-TRTSFTAEQ 103

  Fly   433 LLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQ--EAEIEKI-------- 487
            |..||.:|:..||:...||.|.:..|.|:|||||:||||||.|.|:.|  ::|:..:        
Zfish   104 LYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRSVVSETAATC 168

  Fly   488 ---KMAALGR-----GAPG 498
               ::...||     |.||
Zfish   169 SVLRLLEQGRLLTPPGLPG 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 28/52 (54%)
vax1NP_919391.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 4/21 (19%)
Homeobox 95..148 CDD:278475 28/52 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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