DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and HOXD1

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens


Alignment Length:335 Identity:87/335 - (25%)
Similarity:115/335 - (34%) Gaps:126/335 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQAD 231
            |::.|..:|.||.|.|...||.    |||..:....|:.|:                        
Human    55 PLAAARPSPSPPAAPARPSVPP----PAAPQYAQCTLEGAY------------------------ 91

  Fly   232 ARANSPPASTSSTPSSTPLGSALGSQ-GNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADH 295
                        .|.:.|..:|.|:. |.:.|.||                 ||...:....|| 
Human    92 ------------EPGAAPAAAAGGADYGFLGSGPA-----------------YDFPGVLGRAAD- 126

  Fly   296 DEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHGPPPGSHMQ---STILSPAA--LASGHV 355
                                      ||             |||:.   |.:.|...  |.||.|
Human   127 --------------------------DG-------------GSHVHYATSAVFSGGGSFLLSGQV 152

  Fly   356 PI----RPTPFSA-LAAAAVAWTG-MGGGVPWPGTRQMPPFGPPGMFPGAGFGG--DANEPPRIK 412
            ..    .|.||.| |.|:|....| .....|.|||.      |..:.|.:|...  ...|..::|
Human   153 DYAAFGEPGPFPACLKASADGHPGAFQTASPAPGTY------PKSVSPASGLPAAFSTFEWMKVK 211

  Fly   413 CNLRKH---------KPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIW 468
            .|..|.         .|:...||.|:|:||..|||:|...:||:.|.|.|.::.|.|.:||||||
Human   212 RNASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIW 276

  Fly   469 FQNRRAKAKR 478
            |||||.|.|:
Human   277 FQNRRMKQKK 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649 29/55 (53%)
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 1/4 (25%)
Homeodomain 233..286 CDD:459649 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.

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