Protein Alignment Dr and pdx1

DIOPT Version :10

• Sequence 1: NP_477324.1
• Gene: Dr / 45285
• FlyBaseID: FBgn0000492
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: NP_571518.2
• Gene: pdx1 / 30721
• ZFINID: ZDB-GENE-990415-122
• Length: 246
• Species: Danio rerio
• Alignment Length: 229
• Identity: 62/229 - (27%)
• Similarity: 87/229 - (37%)
• Gaps: 78/229 - (34%)

  Fly   271 SPLGSHTDSELEYDEEMLQDHEADHDEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLE------ 329
            ||||:.       |:..|.|..:.:....|.:.. ..::...:.:::...|.|.|.||:
Zfish    47 SPLGAQ-------DQPNLTDITSYNMSSRDDLAG-PHLHLPQTSQTSLQSLGGYGDSLDLCGDRN 103

  Fly   330 SPHGPPPGSHMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQMPPFGPPG 394
            ..|.|.|  .|:||        ..|..              ||.|.     |.|         |.
Zfish   104 RYHLPFP--WMKST--------KSHTH--------------AWKGQ-----WTG---------PY 130

  Fly   395 MFPGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLR 459
            |.       :|.|             |::.||.:|..|||.|||:|...:|:|...|.|.:.:|.
Zfish   131 MV-------EAEE-------------NKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLS 175

  Fly   460 LTETQVKIWFQNRRAKAKRLQEAEIEKIKMAALG 493
            |||..:||||||||.|.|:      |:.|..|.|
Zfish   176 LTERHIKIWFQNRRMKWKK------EEDKRRARG 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dr	NP_477324.1	Homeodomain	422..478	CDD:459649	27/55 (49%)
pdx1	NP_571518.2	Homeodomain	138..194	CDD:459649	27/55 (49%)