DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and Dlx4

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001100510.1 Gene:Dlx4 / 303469 RGDID:1308744 Length:238 Species:Rattus norvegicus


Alignment Length:168 Identity:51/168 - (30%)
Similarity:79/168 - (47%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 PFSALAAAAVAWTGMGGGVPWPGTRQMP------PFGP--PGMFPGAGFGGDA------------ 405
            |..|.|::.||...:|..   |||...|      .:|.  ...:||....||:            
  Rat    19 PDLAPASSVVAAYQLGLS---PGTAASPDLSFSQTYGHLLSYSYPGPATPGDSYLSSQQQSAAPS 80

  Fly   406 --------------NEPPRIKCNLRKHKPN-----RKPRTPFTTQQLLSLEKKFREKQYLSIAER 451
                          .|..::..:|...:|:     |||||.:::.||..|.::|:..|||::.||
  Rat    81 RPFHQPTEHPQELEAESEKLALSLEPSQPSLTRKLRKPRTIYSSLQLQHLNQRFQHTQYLALPER 145

  Fly   452 AEFSSSLRLTETQVKIWFQNRRAKAKRL---QEAEIEK 486
            |:.::.|.||:|||||||||:|:|.|:|   ...|:|:
  Rat   146 AQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQSSGELEE 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649 29/55 (53%)
Dlx4NP_001100510.1 Homeodomain 116..172 CDD:459649 29/55 (53%)

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