Protein Alignment Dr and Msx2

DIOPT Version :10

• Sequence 1: NP_477324.1
• Gene: Dr / 45285
• FlyBaseID: FBgn0000492
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: NP_037114.2
• Gene: Msx2 / 25483
• RGDID: 3116
• Length: 267
• Species: Rattus norvegicus
• Alignment Length: 228
• Identity: 102/228 - (44%)
• Similarity: 120/228 - (52%)
• Gaps: 61/228 - (26%)

  Fly   296 DEEEDSIVDIEDMNADDSPRSTPDGLDGSGK-------SL---------------ESPHGPP--- 335
            |||..:::        ..|...|.|.:|..:       ||               |||..||
  Rat    14 DEEGPAVL--------AGPGPGPGGAEGGAEERRVKVSSLPFSVEALMSDKKPPKESPAVPPDCA 70

  Fly   336 -PGSHMQSTILSPAALASGHVP---IRPTPFSALAAAAVAWTGMGGGVPW---PGTRQMPPFGPP 393
             .|:.::..:|....:...|.|   ::|     ...|:|.......|.||   || |..||  |.
  Rat    71 SAGAVLRPLLLPGHGVRDAHSPGPLVKP-----FETASVKSENSEDGAPWIQEPG-RYSPP--PR 127

  Fly   394 GMFPGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSL 458
            .|.|             ..|.|||||.||||||||||.|||:||:|||:||||||||||||||||
  Rat   128 HMSP-------------TTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSL 179

  Fly   459 RLTETQVKIWFQNRRAKAKRLQEAEIEKIKMAA 491
            .||||||||||||||||||||||||:||:||||
  Rat   180 NLTETQVKIWFQNRRAKAKRLQEAELEKLKMAA 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dr	NP_477324.1	Homeodomain	422..478	CDD:459649	50/55 (91%)
Msx2	NP_037114.2	Homeodomain	143..199	CDD:459649	50/55 (91%)