DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dr and ceh-43

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001338832.1 Gene:ceh-43 / 175581 WormBaseID:WBGene00000463 Length:282 Species:Caenorhabditis elegans


Alignment Length:164 Identity:57/164 - (34%)
Similarity:75/164 - (45%) Gaps:37/164 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 PPGSHMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPGTRQM-------PPFGP 392
            ||.|:...:.:||      :.|....|.|:.       .|..||..: ||.|.       ||  .
 Worm    22 PPTSNGAGSNVSP------YFPYHAYPTSST-------NGATGGSMY-GTPQQTSAYAMYPP--G 70

  Fly   393 PGMFPGAGFGGDAN----EPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAE 453
            ||..|...|.....    |....|.|: |.|..|||||.:.:.||..|:|||::.|||::.:||.
 Worm    71 PGSSPEEAFPEHTTTKIVEGCEAKYNV-KGKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAA 134

  Fly   454 FSSSLRL---------TETQVKIWFQNRRAKAKR 478
            .:..|.|         ||.||||||||||:|.|:
 Worm   135 LAHELGLSQTQRAQPITEFQVKIWFQNRRSKQKK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 29/61 (48%)
ceh-43NP_001338832.1 Homeobox 105..168 CDD:365835 29/62 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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