DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and NKX6-3

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001351770.1 Gene:NKX6-3 / 157848 HGNCID:26328 Length:265 Species:Homo sapiens


Alignment Length:215 Identity:63/215 - (29%)
Similarity:90/215 - (41%) Gaps:61/215 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 TPDGLDGSGKSLESPHGPPPGSHMQSTILS-PAA-----LASGHVPIRPTPFSALAAAAVAWTGM 375
            :|.|| |...:..:|||       .:.||| |.|     |.||:..:  ..|..|::..|.::..
Human    39 SPPGL-GPQLAAGTPHG-------ITDILSRPVAAPNNSLLSGYPHV--AGFGGLSSQGVYYSPQ 93

  Fly   376 GG--------------------GVPWPGTRQMPPFGPPGMFPGAGFGGDANEPPRIKCNLRKHKP 420
            .|                    |..|.|.||.                 :|.|..:..::.|.| 
Human    94 VGNFSKAGNEYPTRTRNCWADTGQDWRGGRQC-----------------SNTPDPLSDSIHKKK- 140

  Fly   421 NRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIE 485
              ..|..||..|:.:|||.|.:.:||:..|||..:.||.:||:|||:||||||.|.::....|  
Human   141 --HTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALE-- 201

  Fly   486 KIKMAALGRGAPGAQWAMAG 505
              ..::..| |||...|.||
Human   202 --PSSSTPR-APGGAGAGAG 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649 27/55 (49%)
NKX6-3NP_001351770.1 Homeodomain 138..196 CDD:459649 29/60 (48%)

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