DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and Nkx6-2

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_899071.2 Gene:Nkx6-2 / 14912 MGIID:1352738 Length:277 Species:Mus musculus


Alignment Length:199 Identity:64/199 - (32%)
Similarity:93/199 - (46%) Gaps:47/199 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 PRSTPDGL-DGSGKSLESPHGPPPGSHMQSTILS---------PAALASGHVPIRPTPFSALAAA 368
            |..||.|: |..|:.:.:..|...||..:...|:         .||:|.|:    |.|.:.|.  
Mouse    53 PLGTPHGISDILGRPVGAAGGGLLGSLPRLNGLASSAGVYFGPAAAVARGY----PKPLAELP-- 111

  Fly   369 AVAWTGMGGGVP--WPGTRQMPPFGPPGMFPGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQ 431
                    |..|  |||..|..|:..|.:...|..||..:     |...:||.     |..|:.|
Mouse   112 --------GRPPIFWPGVVQGSPWRDPRLAGSAQAGGVLD-----KDGKKKHS-----RPTFSGQ 158

  Fly   432 QLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAK-----------AKRLQEAEIE 485
            |:.:|||.|.:.:||:..|||..:.||.:||:|||:||||||.|           ||:.|:::.|
Mouse   159 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAE 223

  Fly   486 KIKM 489
            |:|:
Mouse   224 KLKV 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 27/63 (43%)
Nkx6-2NP_899071.2 Homeobox 151..205 CDD:395001 27/58 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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