DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dr and CDX1

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001795.2 Gene:CDX1 / 1044 HGNCID:1805 Length:265 Species:Homo sapiens


Alignment Length:220 Identity:64/220 - (29%)
Similarity:89/220 - (40%) Gaps:65/220 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 DSP----RSTPDGLDGSGKSLESPHGPPPG----------SHMQ--------------------- 341
            |||    .:.|..| |.|.....|..|||.          ||::                     
Human    10 DSPVYPGPARPASL-GLGPQAYGPPAPPPAPPQYPDFSSYSHVEPAPAPPTAWGAPFPAPKDDWA 73

  Fly   342 --------STILSPAALASG------HVPIRPTPFSALAAAAVAWTGMGGGVP-WPGTRQMPPFG 391
                    :...|||:||.|      .||..|.|...|.|..:.    |.|.| .||.::..|:.
Human    74 AAYGPGPAAPAASPASLAFGPPPDFSPVPAPPGPGPGLLAQPLG----GPGTPSSPGAQRPTPYE 134

  Fly   392 PPGMFPGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSS 456
            .......||.||.:.          |.:...|.|..:|..|.|.|||:|...:|::|..::|.::
Human   135 WMRRSVAAGGGGGSG----------KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAA 189

  Fly   457 SLRLTETQVKIWFQNRRAKAKRLQE 481
            :|.|||.||||||||||||.:::.:
Human   190 NLGLTERQVKIWFQNRRAKERKVNK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 27/52 (52%)
CDX1NP_001795.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 9..153 36/157 (23%)
Caudal_act 13..138 CDD:282574 28/129 (22%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536 157..178 8/20 (40%)
Homeobox 158..210 CDD:278475 27/51 (53%)
Interaction with 5-mCpG DNA. /evidence=ECO:0000305|PubMed:28473536 196..207 9/10 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..265 2/8 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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