DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and hmx2

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:283 Identity:60/283 - (21%)
Similarity:101/283 - (35%) Gaps:66/283 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NADLHENNLDVASIVTTAATGSAMAAMVKANEPPTVEGQQQLDQQLSNEPCPSTSTGKGGQQQAG 132
            |:.:|..: ||.......||.|..:|        :.|....||:..::.  .||.||:.|.....
 Frog   457 NSSVHTGS-DVEQDAEKKATSSHFSA--------SEESMDFLDKSTASP--ASTKTGQAGSLSGS 510

  Fly   133 ----TPQIVVGTIELNNLNGDIANHKEKEIGTSNQFETLTL-ID----EDDEEEQDRNCSNAHSS 188
                :||          |:..|....:|   ||.....|.| :|    |.|.:|...:.....:.
 Frog   511 PKPFSPQ----------LSAPITTKTDK---TSTTGSILNLNLDRSKAEMDLKELSESVQQQSTP 562

  Fly   189 SSLLSSNNDNRSAEENNLHNA-----STLAIGEQHRRRSRRRSSQKDRRSAEDI-DSIDQADSAV 247
            ..|:|.....||..:.||...     :.|.|.|                .:||: .:::.:||..
 Frog   563 VPLISPKRQIRSRFQLNLDKTIESCKAQLGINE----------------ISEDVYTAVEHSDSED 611

  Fly   248 DVRHHDEEEPNVFDDEVR---EEDQKQQKAGSSPNASAAAVRRRKN-----QRQRSRQRRSPALA 304
            ..:....:...:.|||.:   |.:..:.|.|...:...:||:::..     :.:...:..|||..
 Frog   612 SEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASE 676

  Fly   305 HRDQ---VDGVDGEEQKEPYEKA 324
            ..|.   .|....|.:|:..|||
 Frog   677 KADPGAVKDKASPEPEKDFSEKA 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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