DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dr and meox2

DIOPT Version :10

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001116898.1 Gene:meox2 / 100144655 XenbaseID:XB-GENE-852818 Length:300 Species:Xenopus tropicalis


Alignment Length:352 Identity:84/352 - (23%)
Similarity:118/352 - (33%) Gaps:116/352 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 PAAVAHHAHLLQAAHAAAAAHAQHQAMAAQLRQQQQQADARANSPPASTSSTPSSTPLGSALGSQ 257
            |.|.:...|  ..|.::.|.|.:...|               :.|..|:||  ||..|......:
 Frog    12 PHATSQGLH--PFAQSSLALHGRSDHM---------------SYPDLSSSS--SSCILTGYPNEE 57

  Fly   258 GNVASTPAKNERHSPLGSHTDSELEYDEEMLQDHEADHDEEEDSIVD----IEDMNADDSPRSTP 318
            |...|...:...|.                 ..|...|.:::...:.    |..|::  .|.||.
 Frog    58 GMFGSQHHRGHHHH-----------------HHHHHHHQQQQHQTLQSNWHIPQMSS--PPASTR 103

  Fly   319 DGLDGSGKSLESPHGPPPGSHMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPWPG 383
            ..|     .|:...|||..|.      ||:.|.|....:...  |:..||.|  ||         
 Frog   104 HSL-----CLQQESGPPDLSG------SPSILCSNTSSLGTN--SSTGAACV--TG--------- 144

  Fly   384 TRQMPPFGPPGMFPG------------------AGFGGDANEPPRIKCNLRKHKPNRKPRTPFTT 430
                 .:|...:.|.                  ..:..|.|..|            ||.||.||.
 Frog   145 -----DYGRQTLSPAEAEKRTGKRKSDSSDSQEGSYKSDVNSKP------------RKERTAFTK 192

  Fly   431 QQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKRL---------QEAEIEK 486
            :|:..||.:|....||:...|.|.:.:|.|||.|||:||||||.|.||:         :|.|:..
 Frog   193 EQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREKELGN 257

  Fly   487 IKMAALGRGAPGAQWAMAGYFHPSLMH 513
            :|...|   .|.   .::|....||.|
 Frog   258 VKKGTL---LPS---ELSGIRSSSLQH 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeodomain 422..478 CDD:459649 28/55 (51%)
meox2NP_001116898.1 Homeodomain 184..240 CDD:459649 28/55 (51%)

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