DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dr and not

DIOPT Version :9

Sequence 1:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001164669.1 Gene:not / 100038059 XenbaseID:XB-GENE-478518 Length:236 Species:Xenopus tropicalis


Alignment Length:212 Identity:63/212 - (29%)
Similarity:91/212 - (42%) Gaps:50/212 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 LESPHGPPPGSHMQSTILSPAALASGHVPIRP--------------TPFSALAAAAVAWTGMG-G 377
            |.||..|..|.|:..   .||...|..:|..|              .|...::....:|.... .
 Frog     2 LHSPVFPAFGHHLAE---HPAMSISSELPRTPKASFNIDSILSRADRPVPKVSMEMPSWQPPSPP 63

  Fly   378 GVPWPGTRQMPPFGPPGMF-PGAGFGGDANEP----PRIKCN-----------LRKHKPN----- 421
            .||:..:..|.|:.|..:. |..|:...|.:.    ||.:|.           |..|.||     
 Frog    64 SVPYRYSYGMMPYPPVWLIKPTVGYPSMAQQQPMRMPRGECPCPDPACKERGLLYSHCPNGSMNP 128

  Fly   422 ----------RKPRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKA 476
                      ::.||.||.:||..|||:|.::||:...||.:.:|:|.|||||||:||||||.|.
 Frog   129 LSWRTGPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKW 193

  Fly   477 KRLQEAEIEKIKMAALG 493
            :: |..|.:|.|::..|
 Frog   194 RK-QSLEQKKAKLSQFG 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrNP_477324.1 Homeobox 424..477 CDD:278475 30/52 (58%)
notNP_001164669.1 Homeobox 142..194 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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