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Protein Alignment Dr and cdx1b
DIOPT Version :9
Sequence 1: | NP_477324.1 |
Gene: | Dr / 45285 |
FlyBaseID: | FBgn0000492 |
Length: | 515 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001092232.1 |
Gene: | cdx1b / 100004956 |
ZFINID: | ZDB-GENE-070615-29 |
Length: | 255 |
Species: | Danio rerio |
Alignment Length: | 183 |
Identity: | 51/183 - (27%) |
Similarity: | 83/183 - (45%) |
Gaps: | 41/183 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 330 SPHGPPPGSHMQSTILSPAALASGHVPIRPTPFSALAAAAVAWTGMGGGVPW--PGTRQMPPFG- 391
:|:||..|....|| |.:...|..||::....:..:.:...|.. |..::..|:.
Zfish 74 TPYGPGSGVSSSST---------GQLGFSPPEFSSVQTPGLLQSSINSSVGQLSPNAQRRNPYDW 129
Fly 392 -----PPGMFPGAGFGGDANEPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLSIAER 451
|| |..|| |.:...|.|..:|..|.|.|||:|...:|::|..:
Zfish 130 MRRSVPP-----ASSGG-------------KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRK 176
Fly 452 AEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKIKMAAL------GRGAPG 498
||.:::|.|:|.||||||||||||.:::.:.::::.:.|:. |...||
Zfish 177 AELATALSLSERQVKIWFQNRRAKERKINKKKMQQPQPASTTTPTPPGSALPG 229
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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