DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dib and Cyp27a1

DIOPT Version :9

Sequence 1:NP_524810.2 Gene:dib / 45282 FlyBaseID:FBgn0000449 Length:489 Species:Drosophila melanogaster
Sequence 2:NP_849178.2 Gene:Cyp27a1 / 301517 RGDID:727915 Length:533 Species:Rattus norvegicus


Alignment Length:495 Identity:135/495 - (27%)
Similarity:225/495 - (45%) Gaps:68/495 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LPGIGSYSW----------LRLHQAGQDKYEKYGAIVRETIVPGQDIVWLYDPKDIALLLNERDC 94
            |||.|:..:          |.||:.......|||.:...|.....::.....|....::..|...
  Rat    62 LPGPGTLRFLFQLFLRGYVLHLHELQALNKAKYGPMWTTTFGTRTNVNLASAPLLEQVMRQEGKY 126

  Fly    95 PQRRSHLALAQYRKSRPDVYKTTGLLPTNGPEWWRIRAQVQKELSAPKSVRNFVRQVDGVTKEFI 159
            |.|.|   :.|:::.|.....:.|:..|.|.:|:.:|..:.:.:..|.....:...::.|..:||
  Rat   127 PIRDS---MEQWKEHRDHKGLSYGIFITQGQQWYHLRHSLNQRMLKPAEAALYTDALNEVISDFI 188

  Fly   160 RFLQ----ESRNGGAI-DMLPKLTRLNLELTCLLTFGAR---LQSFTAQEQDPRSRSTRLMDAAE 216
            ..|.    ||.:|..: |:...|..|.||..|.:.|..|   |:....::.....||..||    
  Rat   189 ARLDQVRTESASGDQVPDVAHLLYHLALEAICYILFEKRVGCLEPSIPEDTATFIRSVGLM---- 249

  Fly   217 TTNS---CILP--TDQGLQLWR-----------FLETPSFRKLSQAQSYMESVALELVEENVRNG 265
            ..||   ..||  :...|..|:           |.|....:|:.:.::.:::...:.|:      
  Rat   250 FKNSVYVTFLPKWSRPLLPFWKRYMNNWDNIFSFGEKMIHQKVQEIEAQLQAAGPDGVQ------ 308

  Fly   266 SVGSSLISAY----VKNPELDRSDVVGTAADLLLAGIDTTSYASAFLLYHIARNPEVQQKLHEEA 326
                  :|.|    :....|...:.|||..:|:|||:||||....:.|||:::|||:|:.||:|.
  Rat   309 ------VSGYLHFLLTKELLSPQETVGTFPELILAGVDTTSNTLTWALYHLSKNPEIQEALHKEV 367

  Fly   327 RRVLPSAKDELSMDALRTDITYTRAVLKESLRLNPIAVGVGRILNQ-DAIFSGYFVPKGTTVVTQ 390
            ..|:|..|...:.|.....:  .:||:||:|||.|:.....||:.: :...:|:..||.|..|..
  Rat   368 TGVVPFGKVPQNKDFAHMPL--LKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLC 430

  Fly   391 NMVACRLEQHFQDPLRFQPDRWLQHRSALN-----PYLVLPFGHGMRACIARRLAEQNMHILLLR 450
            :.|..|....|.:|..|||.|||:.|...|     |:..:|||:|:|:|:.||:||..|.:||.|
  Rat   431 HYVVSRDPSVFPEPESFQPHRWLRKREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELEMQLLLSR 495

  Fly   451 LLREYELIWSGSDDEMGVKTLLINKPDAPVLIDLR-LRRE 489
            |:::||::.|....|:...:.::..|...|  .|| |:|:
  Rat   496 LIQKYEVVLSPGMGEVKSVSRIVLVPSKKV--SLRFLQRQ 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dibNP_524810.2 p450 25..446 CDD:299894 121/449 (27%)
Cyp27a1NP_849178.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..58
cytochrome_P450 91..527 CDD:425388 124/458 (27%)
Sterol-binding. /evidence=ECO:0000255 386..400 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X156
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.