DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and CSS1

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_012097.1 Gene:CSS1 / 854637 SGDID:S000001431 Length:995 Species:Saccharomyces cerevisiae


Alignment Length:424 Identity:77/424 - (18%)
Similarity:114/424 - (26%) Gaps:140/424 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ALLQGRTVDAGAGDSLSGVRQSCSNEGEEVQLKNQPQIFTCFKCECQNGFVNCRDTCPPVNDCYI 108
            |.:.|.|.....|.|::|   |.::......:.....::|     ....:||...|.  |..|..
Yeast   621 ASVTGSTASTSFGASVTG---STASTSFGASVTGSTSVYT-----TTLDYVNATSTV--VVSCSE 675

  Fly   109 LDKSNG-----TCCRRCKGCSFRGMSYESGSEWNDPEDPCKTYKCVATVVTETI-QKCY-----S 162
            ...|||     |....|...:....|.:        |..|........|||||: .|.|     :
Yeast   676 TTDSNGNVYTITTTVPCSSTTATITSCD--------ETGCHVSTSTGAVVTETVSSKSYTTATVT 732

  Fly   163 QCDNNQLQPPRPGECCPTCQGCKINGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPC 227
            .||:|               ||  |.:||..                      .|||:|......
Yeast   733 HCDDN---------------GC--NTKTVTS----------------------ECSKETSATTAS 758

  Fly   228 PMSKQIKRPDEC----C------PRCPQNHSFLPVPGKCLFNKSVYPEKTQFMPDRCTNCTCLNG 282
            |.|........|    |      ...|:..:...|..:.....:|         ..|.:..|...
Yeast   759 PKSYTTVTVTHCDDNGCNTKTVTSEAPEATTTTTVSSQSYTTATV---------THCDDNGCKTK 814

  Fly   283 TSVCQRP-------------TCPILECAPEFQEPDGCCPRCAVAEVRSECSLDGIVYQNNETWDM 334
            |...:.|             |..:.:|     :.:||..:...:|...|.|......::..|..:
Yeast   815 TVTSEAPEATTTTVSPKTYTTATVTQC-----DDNGCSTKTVTSECPEETSATTTSPKSYTTVTV 874

  Fly   335 GPCRSCRCNGGTI------------------RCAQMRCPAVKCRANEELKQPPGECCQRCVETAG 381
            ..|....||..|:                  .....:|....|.......:.|.|..    ||:.
Yeast   875 THCDDNGCNTKTVTSEAPEATTTTVSPKTYTTATVTQCDDNGCSTKTVTSEAPKETS----ETSE 935

  Fly   382 TCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMG 415
            |.....|.|:             |.:||..|..|
Yeast   936 TSAAPKDIHY-------------CHWLLNGDDNG 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 12/68 (18%)
VWC 256..310 CDD:278520 9/66 (14%)
VWC 319..376 CDD:214564 10/74 (14%)
VWD 371..536 CDD:214566 11/45 (24%)
C8 580..646 CDD:285899
CSS1NP_012097.1 Hyphal_reg_CWP 313..596 CDD:371712
PRK12355 627..>977 CDD:237072 75/418 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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