DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and vwc2

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001108100.1 Gene:vwc2 / 798521 ZFINID:ZDB-GENE-090313-315 Length:309 Species:Danio rerio


Alignment Length:228 Identity:62/228 - (27%)
Similarity:90/228 - (39%) Gaps:66/228 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LQGRTVDA----------------GAGDSLSGVRQ---------SCSNE-------GEEVQLKNQ 78
            |||:|::|                .|..||..:.:         .|.:|       ||    |..
Zfish    94 LQGKTLEAWSEQESLKQTEGAPTEEANVSLDAIDEYAYPDYRGKGCMDETGFVFAIGE----KFT 154

  Fly    79 PQIFTCFKCEC-QNGFVNCRDTCPPVND-CYILDKSNGTCCRRCKG----CSFRGMSYESGSEWN 137
            |...|| .|.| ..|.:..:..||.::. |..:|.|.  ||.:||.    |.|||..|.|..|:.
Zfish   155 PGPSTC-PCLCTDEGPLCAQPECPKLHPRCLRVDTSQ--CCPQCKEKKNYCEFRGKIYSSLEEFK 216

  Fly   138 DPEDPCKTYKCVAT-VVTETIQKC-YSQCDNNQLQPPRPGECCPTCQ---GCKINGQTVAEGHEV 197
              ..||:..:|..: .|..::..| .::|.:.:.:   |.:|||.|:   .|..:...:..|.||
Zfish   217 --VSPCEKCRCEPSGEVLCSVSACPQTECVDPEYE---PDQCCPVCKSGPNCYADTSVIPAGREV 276

  Fly   198 DASIDDRCLVCQC---RGT-----QLTCSKKTC 222
            ..   |.|.:|.|   .||     |.||||..|
Zfish   277 KI---DECTICYCTYEEGTWRIERQATCSKNEC 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 16/47 (34%)
VWC 256..310 CDD:278520
VWC 319..376 CDD:214564
VWD 371..536 CDD:214566
C8 580..646 CDD:462584
vwc2NP_001108100.1 VWC 202..257 CDD:450195 17/59 (29%)
Blue background indicates that the domain is not in the aligned region.

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