DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Otogl

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001171038.1 Gene:Otogl / 628870 MGIID:3647600 Length:2325 Species:Mus musculus


Alignment Length:901 Identity:174/901 - (19%)
Similarity:273/901 - (30%) Gaps:383/901 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QSCSNEGEEVQLKNQPQIFTCFKCECQNGFV--NCRDTCPP---------------VNDCYILD- 110
            ::||:.|..:|  :....|.....:|.:.||  :|...|||               ::.||..| 
Mouse   358 RACSHAGFPIQ--DWRDDFPACTDKCDDSFVHRDCISCCPPSCTFEKQCLGSNLHCLDGCYCADG 420

  Fly   111 --KSNGTC--CRRCKGCSFRGMSYESGSE--------------WNDPEDPC-------------- 143
              ..||||  ...|. |||.|::|..||:              ||..|..|              
Mouse   421 LIMDNGTCISLESCP-CSFHGLAYSVGSKIEQECTECVCVGGVWNCTEHDCPVQCSVVGDSHFTT 484

  Fly   144 ---KTYK----CVATVV--------TETIQKCYSQCD-------------------NNQLQPPRP 174
               :.|.    |...:|        |.|:||.:  |:                   |.|:...|.
Mouse   485 FDGRHYSFIGLCQYILVKGTGKDRFTITLQKAH--CEQNLGLVCLQSITLILEDDFNKQVTLSRG 547

  Fly   175 GE----------------------------------------------------------CCPTC 181
            |:                                                          .|.|.
Mouse   548 GQIVTSPNQGFTLNGIVEIQTLSSLFILLRTTFGLKILFAIDGERIYIQLSSAWKRRTLGLCGTF 612

  Fly   182 QG-----------------------------------------CKINGQTVAEGHEVDA---SID 202
            .|                                         |.||.|.:......|.   .:.
Mouse   613 NGNIRDDFLSPSGMIEGTPQLHAHAWRVSSTCFAPVHVPMVDPCNINQQNIGYAAHCDVIHQELF 677

  Fly   203 DRCLV---------------CQC------------------RGTQL-----------TCSK---- 219
            ..|.|               |:|                  ||..:           .|.|    
Mouse   678 APCHVYVSPGLYYQLCRHDACKCGSPCLCNALAHYAYLCGQRGVPIDFRAHISFCAVVCQKGMLY 742

  Fly   220 --------KTCPVLPCPMSKQIKRPDECCP--RCPQNHSF-------LPV-PGKCLFNKSVYPEK 266
                    ::|..|..|  :|.|  |:|..  .||:...:       :|: ..:|.:..|:| :.
Mouse   743 HHCSSLCLRSCTSLSSP--EQCK--DDCAEGCNCPEGKFYEETLNFCVPIYHCRCHYRGSIY-QP 802

  Fly   267 TQFMPDRCTNCTCLNGTSVCQ----------------------------------RPTCPIL--- 294
            .:.:|.....|.|.|||..|.                                  ..||..|   
Mouse   803 GELIPTPSGLCQCSNGTVKCDELATPSTVHACPEGKEYFDCRFPDPALPAGGINCETTCANLAMN 867

  Fly   295 -ECAPEFQEPDGCCPRCAVAEVRSECSLDGIVYQNNETWDMG-------PCRSCRCNGGTIRCAQ 351
             .|||......||.....:||.:.:|.:........:.|:..       ||.:|.|..|...|..
Mouse   868 FTCAPSSPCISGCVCAAGMAEHKGKCYVPESCPCIWKDWEYSSGEVISTPCYTCVCRRGMFNCTY 932

  Fly   352 MRCPAVKCRANEELKQPPGECCQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMGK 416
            ..||||                         |||:||.|:.:|||        .:|...|||  :
Mouse   933 YPCPAV-------------------------CTVYGDRHYHSFDG--------LEYDYISDC--Q 962

  Fly   417 TFHIRLTNEGRGTRRASWAKTVTLSLRNLK-----VNLGQRMRVKVNGTRVTL---PYFVVAGG- 472
            .|.|:.|::          ..:::..:|.|     :...:.:.:.:..|.:.|   ||.....| 
Mouse   963 VFLIKSTDD----------SDISVISQNKKCFDNDIVCSKSVLISIGDTEIYLNDAPYKQKRSGF 1017

  Fly   473 --QNVTIERLANGG--AVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTG 533
              ::....:|...|  .|:...|..:|:.|:....:.:.|..::|.:|.||||||:..:.:|:|.
Mouse  1018 FLESRPEYQLWKAGFYIVIYFPEEDITILWDEKTTIHIKVGPQWKNKLAGLCGNFDKCTSNDMTT 1082

  Fly   534 KDGRSHGDDEVWHFANSWKVGGPKSCSRKREFLAATPTCDKRKSNF-----YCHPLSVPALFGEC 593
            .:.....:.:|  |.:||.:|   .|   .:.:.|...|:..::.|     .|..| ...:|..|
Mouse  1083 SNNIEVRNAQV--FGDSWALG---QC---EDLMEALKPCEAHQNKFPYAKRECSIL-YSDVFAPC 1138

  Fly   594 NERLNPENYKAACRMDVCECPSG---DCHCDSFAAYAHECRRLGVQLPDWRSATNC 646
            ...::..::...|..|.|.|..|   :|.|.|.||||::|.:.||.: .|||.|.|
Mouse  1139 RNVIDVTSFAKNCHEDTCNCNLGGDCECLCTSVAAYAYKCCQEGVPV-HWRSPTVC 1193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 20/119 (17%)
VWC 256..310 CDD:278520 18/91 (20%)
VWC 319..376 CDD:214564 12/63 (19%)
VWD 371..536 CDD:214566 40/177 (23%)
C8 580..646 CDD:285899 23/68 (34%)
OtoglNP_001171038.1 VWD 114..260 CDD:365869
C8 312..373 CDD:370094 4/16 (25%)
TIL 386..434 CDD:366828 12/47 (26%)
VWD 463..625 CDD:214566 19/163 (12%)
C8 669..732 CDD:370094 7/62 (11%)
TIL 736..791 CDD:366828 12/58 (21%)
VWD 930..1085 CDD:214566 45/199 (23%)
C8 1120..1194 CDD:214843 25/76 (33%)
Fascin <1263..1350 CDD:390083
VWD 1498..1671 CDD:214566
C8 1705..1775 CDD:214843
TIL 1778..1836 CDD:366828
GHB_like 2252..2325 CDD:389804
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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