DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and kcp

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_697494.6 Gene:kcp / 569039 ZFINID:ZDB-GENE-070705-443 Length:2200 Species:Danio rerio


Alignment Length:679 Identity:215/679 - (31%)
Similarity:293/679 - (43%) Gaps:135/679 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 EGEEVQLKNQPQIFTCFKCECQNGFVNCRDTCPPVNDCYILDKSNGTCCRRCKGCSFRGMSYESG 133
            :||.:.|...|    |.||.|..|.|.|.........|.......|:||.||:||.:.|:..:.|
Zfish  1490 DGESLTLPADP----CLKCTCVAGEVKCVSPRCKTLSCVHQLTDPGSCCPRCRGCIYDGVERQEG 1550

  Fly   134 SEWNDPEDPCKTYKCVATVVTETIQKCYSQCDNNQLQPPRPGECCPTCQGCKINGQTVAEGHEVD 198
            |.|......|.:..||..|.|.:...|.|.|.|   |...||||||.|..|...|:....|....
Zfish  1551 STWFASAGLCMSCMCVDGVTTCSEVHCLSTCIN---QITVPGECCPVCADCVFEGRVYGPGESFQ 1612

  Fly   199 AS--------------------------------------------------------------- 200
            .|                                                               
Zfish  1613 PSEDPCQICTCEVMPDGEQHLRCYRKQCPSLVDCPKHNILHSSSDSCCPVCTQPLSNCTATLIGN 1677

  Fly   201 ----IDDRCLVCQCRGTQLTCSKKTCPVLPCPMSKQIKRPDECCPRCPQNHSFLPVPGKCLFNKS 261
                .||.|..|||:....||..:.||.|.|..|.|...||.|||.|          ..|:...|
Zfish  1678 EVLATDDPCFTCQCKDLTWTCVHRGCPPLSCSPSDQHTPPDSCCPIC----------DVCVLEGS 1732

  Fly   262 VYPEKTQFMPD---------RCTNCTCLNGTSVCQRPTCPILECAPEFQEPDG---------CCP 308
                .|: :||         .||.|.|..|     ...|.:.|||| .|.|||         ||.
Zfish  1733 ----NTR-VPDGHRWTDKENECTTCICNKG-----HIECDLQECAP-LQCPDGSVKVKNPGKCCQ 1786

  Fly   309 RCA-VAEV-----RSECSLDGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPAVKCRANEELKQ 367
            .|. |.:|     .:||..:|.:|::::.|::..|.:|.|..|.:.|...|||.:.|.::|....
Zfish  1787 ECTEVVDVVYIYPSAECVYEGQIYRDSDQWEVDECTTCTCVNGDVHCQTQRCPTLTCASDETPAL 1851

  Fly   368 PPGECCQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKTFHIRLTNEGRGTRRA 432
            .||.||..|:....||.||||||:||||||...|||:|.|:||.||.|..|.:.::||.||.:..
Zfish  1852 VPGMCCPHCIPHPATCVVFGDPHYRTFDGKMVHFQGTCTYVLAQDCEGGDFSVHVSNEDRGRKGV 1916

  Fly   433 SWAKTVTLSLRNLKVNLGQRMRVKVNGTRVTLPYFVVAGGQNVTIERLANGGAVMLRSEMGLTLE 497
            ||.|.||:.:.::.:.|.|...|||:...|:|||.   ....:.:||..|  .::|.:.:||.:.
Zfish  1917 SWTKEVTVFIGDVVIQLYQDWIVKVDYEPVSLPYL---KEPYIYLERKTN--TILLNTNVGLKVL 1976

  Fly   498 WNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRSHGDDEVWHFANSWKVGGPKSCSRK 562
            |||...|:||||..:|..:||||||||...:||:..::|:....:..  |.||||||...|..:.
Zfish  1977 WNGRSHLEVSVPGTYKNHMCGLCGNFNNYPQDDMKLRNGQIATSEAA--FGNSWKVGNGNSSVQC 2039

  Fly   563 REFLAATPTCD-----KRKSNFYCHPLSVPALFGECNERLNPENYKAACRMDVCECPSG--DCHC 620
            .:.....|..:     ::.:|..|..|..| :|..|::.:.||.:.|:|..|:|.|.|.  ||.|
Zfish  2040 PDVRNINPCKEAGYSARKTANSRCAVLKSP-VFERCHKLVLPEMFFASCVYDLCACGSNMDDCLC 2103

  Fly   621 DSFAAYAHECRRLGVQLPDWRSATNCPAG 649
            |....||.|||..|: :..||:.|.|..|
Zfish  2104 DVLEVYASECREAGI-IVQWRTPTLCAVG 2131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 23/125 (18%)
VWC 256..310 CDD:278520 21/71 (30%)
VWC 319..376 CDD:214564 18/56 (32%)
VWD 371..536 CDD:214566 71/164 (43%)
C8 580..646 CDD:285899 26/67 (39%)
kcpXP_697494.6 LamG 38..>188 CDD:304605
VWC 365..418 CDD:302663
VWC 424..480 CDD:302663
VWC 540..596 CDD:302663
VWC 599..655 CDD:302663
VWC <681..714 CDD:302663
VWC 778..836 CDD:302663
VWC 891..947 CDD:302663
VWC 1305..1361 CDD:302663
VWC 1422..1478 CDD:302663
VWC 1598..1663 CDD:302663 4/64 (6%)
VWC 1803..1860 CDD:278520 18/56 (32%)
VWD 1867..2016 CDD:278521 67/153 (44%)
C8 2059..2128 CDD:285899 27/70 (39%)
TIL 2139..2192 CDD:280072
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 141 1.000 Domainoid score I4682
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104860at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46698
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5817
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.950

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