DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and chrdl2

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001124431.1 Gene:chrdl2 / 563085 ZFINID:ZDB-GENE-081104-305 Length:454 Species:Danio rerio


Alignment Length:334 Identity:73/334 - (21%)
Similarity:101/334 - (30%) Gaps:114/334 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 KTYKCVATVVTETIQKCYSQCDNNQLQPPRPGECCPTCQGCKINGQTVAEGHEVDASIDD----R 204
            |...|:.........:|:.|.:...|   |||:..    .|....:|...|......::.    .
Zfish     3 KRMTCLKHFFILVTMRCFVQGETEAL---RPGKNV----FCTFKEKTYRPGDSWHPYLEPFGFMF 60

  Fly   205 CLVCQCRGTQLT-CSKKTCPVLPCPMSKQIKRPDECCPRCPQNH---SFLPVPGK-CLFNKSVYP 264
            |:.|.|....|. |:...||.|.|  ...:....:|||||...|   :.|..|.| |.:|.|:|.
Zfish    61 CMRCTCTEPGLVKCNSIKCPSLRC--ENPVTNSQQCCPRCADEHRTPAGLRAPIKTCRYNGSIYQ 123

  Fly   265 EKTQF-----MPDR----CTNCTCLNGTSVCQRPTCPILECAPEFQEPDGCC------------- 307
            ....|     .|.|    |..|||.||...|...:|..:.|:.....||.||             
Zfish   124 TGETFANHELFPTRQSNQCVMCTCSNGNIFCALKSCQPITCSSPVPVPDTCCLVCKESAIDINSA 188

  Fly   308 -----------------PRCAVAEVRSE------------------------------------- 318
                             .:||..:||..                                     
Zfish   189 LFEDGGQQLNRGARHSVDQCAADQVRGRSVRATPSTLRGSPRGLNLQTLHLKGASETTVKILLQR 253

  Fly   319 -----CSLDGIVYQNNETWD--MG---PCRSCRCNGGTIRCAQMRCPAVKCRANEELKQPP---- 369
                 |...|..|.:.:.|.  :|   .|..|.|..|...|.::.||      |:...|.|    
Zfish   254 KHQRACVYSGKTYSHGDVWHPVLGKILECILCTCRDGFQECKRVTCP------NQYPCQHPIKIE 312

  Fly   370 GECCQRCVE 378
            |:||:.|.|
Zfish   313 GKCCKICPE 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 15/63 (24%)
VWC 256..310 CDD:278520 20/92 (22%)
VWC 319..376 CDD:214564 18/65 (28%)
VWD 371..536 CDD:214566 4/8 (50%)
C8 580..646 CDD:462584
chrdl2NP_001124431.1 VWC 36..98 CDD:450195 15/63 (24%)
VWC 115..178 CDD:450195 20/62 (32%)
VWC 259..319 CDD:450195 18/65 (28%)
CHRDL_1_2_C 339..443 CDD:437380
Blue background indicates that the domain is not in the aligned region.

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