DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and tecta

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_009300199.1 Gene:tecta / 561355 ZFINID:ZDB-GENE-110411-120 Length:2201 Species:Danio rerio


Alignment Length:362 Identity:110/362 - (30%)
Similarity:154/362 - (42%) Gaps:58/362 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 CSLDGIVYQNNET-WDMGPC-RSCRC----NGGTIRCAQMRCPAVKCRANEELKQPPGECCQRCV 377
            ||..|..|:..|. |....| :.|||    |       ::.|....|...|..:|..|  ...|.
Zfish   262 CSYIGRFYRRGEVFWLSDQCTQRCRCLDLDN-------EVICHETPCGQLETCEQVEG--AYYCQ 317

  Fly   378 ET-AGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKT----FHIRLTNEGRGTRRASWAKT 437
            .| ..||.||||||:.||||..:.|||:|.||||..|....    |.:...||.||....||.:.
Zfish   318 PTRTSTCVVFGDPHYHTFDGFLYHFQGTCSYLLARPCWEMPGLPFFSVEAKNENRGVPTVSWLRD 382

  Fly   438 VTLSLRNLKVNL--GQRMRVKVNGTRVTLPYFVVAGGQNVTIERLANGGAVMLRSEMGLTLEWNG 500
            ||:.:.|.:|.|  |....|:|:|...|||..:..|...|    ..:|.||.|.::.||.:.::|
Zfish   383 VTVEVYNHRVTLPKGTLGTVQVDGLIKTLPVQLQLGAVKV----YQSGVAVALETDFGLLVTYDG 443

  Fly   501 AGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRSHGDDEVWHFANSWKV---------GGP 556
            ..:..:|:|:.:....||||||:|....||....||..  .:.|.....||:.         |..
Zfish   444 LHYASISLPSSYFNNTCGLCGNYNDDPADDPVLPDGSL--AESVVELGGSWRAEDTDFRCTDGCA 506

  Fly   557 KSCSRKREFLAATPTCDKRKSNF-----YCHPLS-VPALFGECNERLNPENYKAACRMDVCECPS 615
            ::||          .|:.....|     ||..:: ....|.:|...::|..:..:|..|:|....
Zfish   507 QNCS----------MCEPAAEAFYFRSDYCGLINKTDGPFRDCRAVVDPTAFVYSCVYDMCSNRD 561

  Fly   616 G-DCHCDSFAAYAHECRRLGVQLPDWRS----ATNCP 647
            . ...|.:..|||..|:.|||.:..|||    |..||
Zfish   562 NITTLCQAIQAYALACQALGVTIRPWRSRSFCALTCP 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564
VWC 256..310 CDD:278520
VWC 319..376 CDD:214564 16/62 (26%)
VWD 371..536 CDD:214566 62/171 (36%)
C8 580..646 CDD:285899 20/71 (28%)
tectaXP_009300199.1 NIDO 100..256 CDD:214712
VWD 324..480 CDD:278521 60/159 (38%)
C8 519..594 CDD:214843 20/74 (27%)
TIL 597..650 CDD:280072 2/2 (100%)
VWD 717..875 CDD:214566
C8 913..989 CDD:214843
TIL 992..1046 CDD:280072
VWD 1102..1265 CDD:295339
C8 1349..1420 CDD:285899
TIL 1424..1477 CDD:280072
VWC 1479..1532 CDD:302663
VWD 1539..1690 CDD:278521
C8 1732..1803 CDD:214843
ZP 1850..2102 CDD:214579
Zona_pellucida 1982..2102 CDD:278526
FXa_inhibition 2132..2166 CDD:291342
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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