DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and otogl

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_021328895.1 Gene:otogl / 555569 ZFINID:ZDB-GENE-050419-93 Length:2556 Species:Danio rerio


Alignment Length:685 Identity:155/685 - (22%)
Similarity:231/685 - (33%) Gaps:210/685 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 ESGSEW--------------NDPEDPCKTYKCVATVVTETIQKC-------YSQCDNNQLQPPRP 174
            |.|:.|              .|...||.:    .:.:.:.|:||       :..|..| :.|.  
Zfish   281 EFGNSWAVDLPQERPCPEVDEDFPGPCSS----ESDMDDAIEKCSALLFFPFISCHEN-IDPN-- 338

  Fly   175 GECCPTCQGCKINGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMSKQIKRPDEC 239
                |....| ::...|::..|.           .||  .|....:.|..:..|:.:.......|
Zfish   339 ----PFVVSC-VSDMCVSDDEET-----------FCR--TLVEYTRACSHVGYPVREWRDSFPTC 385

  Fly   240 CPRCPQNHSFLP------VPGKCLFNKSVYPEKTQFMPDRC--TNCTCLNGTSVCQRPTCPILEC 296
            ..||  ..||:.      .|..|.|:|            .|  ||..||:|   |..|...||: 
Zfish   386 ADRC--EDSFVHRDCISCCPPTCTFDK------------ECLGTNLHCLDG---CYCPDGLILQ- 432

  Fly   297 APEFQEPDGCCPRCAVAEVRSECSLDGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPAVKCRA 361
                   :|.|    :|..:..|...|..|......:.| |..|.|.||...|.:..|.|     
Zfish   433 -------NGTC----IAVSQCPCVYHGTAYPLGHVLEQG-CTVCVCMGGLWNCTENNCTA----- 480

  Fly   362 NEELKQPPGECCQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKTFHIRLTNEG 426
                                .|||.||.|..||||:.:...|||:|:|........|.:.|....
Zfish   481 --------------------ECTVVGDTHVTTFDGRIYMHLGSCQYVLVKSRGNTKFTVTLQYTA 525

  Fly   427 RGTRR-------------ASWAKTVTLSLRNLKVNLGQRMRVKVNGTRVTLPYFVVAGGQNVTIE 478
            .|..:             ...::.|||: |:.:|.:|..|       .|.|||    ..:.|.:.
Zfish   526 CGESQEHSCIHSVALVVDEDVSRQVTLT-RDGEVVIGASM-------AVNLPY----SDETVNVR 578

  Fly   479 RLANGGAVMLRSEMGLTL--EWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRSHGD 541
            ||.: ..|.|||..||..  :|.| |.:.:.:.:.:.....||||..||:.|||.....|...|.
Zfish   579 RLTS-LFVGLRSVFGLRFQYDWQG-GRIYLQLDSTWMGSTLGLCGTLNGNLRDDFLSPAGMIEGT 641

  Fly   542 DEVWHFANSWKVGGPKSCSRKREFLAATPTCDKRKSN-FY---CHPLSVPALFGECNERLNPENY 602
            .::  ..|:|||.  .:|..........| |:..:.| ||   |..| :..:|..|:..::|..|
Zfish   642 PQL--HVNAWKVS--SACISPVNIPIIDP-CEMNQQNVFYAAQCDVL-LEEVFRPCHAYVSPSMY 700

  Fly   603 KAACRMDVCECPSGDCHCDSFAAYAHECRRLGVQL------------------------------ 637
            ...||...|.|.| .|.|.:.:.||:.|.:..|.:                              
Zfish   701 HQQCRYQACRCGS-SCLCTALSHYAYICSKHHVTINFRAHVSECGMVCLGGMMYHPCTSACGRTC 764

  Fly   638 ----------PDWRSATNCPAG-----WRRNATLSS-----FKGNQFY-GDPSFSRMKGRRQKNH 681
                      .|.....:|..|     .|:...|.|     |.|:.|: |:.|||.......:|.
Zfish   765 QSVSSAEVCDGDCAEGCSCTEGTFYDHTRQRCVLLSQCHCYFMGSVFHPGEVSFSSSGPCLCRNG 829

  Fly   682 QLRLQLQQEQQQR----------SKQGQKGRHKPG 706
            ::....::.:.:|          |.:||.||...|
Zfish   830 RMECVPEEREPERGDCPNGKVYYSCRGQSGRGPSG 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 9/58 (16%)
VWC 256..310 CDD:278520 15/55 (27%)
VWC 319..376 CDD:214564 12/56 (21%)
VWD 371..536 CDD:214566 50/179 (28%)
C8 580..646 CDD:285899 19/108 (18%)
otoglXP_021328895.1 VWD 121..261 CDD:214566
C8 319..381 CDD:312319 14/82 (17%)
TIL 394..442 CDD:307783 17/74 (23%)
VWD 471..636 CDD:214566 53/203 (26%)
C8 679..740 CDD:312319 17/62 (27%)
TIL 747..802 CDD:307783 6/54 (11%)
TIL 845..911 CDD:307783 6/20 (30%)
VWD 951..1097 CDD:306577
C8 1131..1205 CDD:214843
VWD 1729..1901 CDD:214566
C8 1936..2006 CDD:214843
GHB_like 2474..2556 CDD:328788
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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