DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Crim1

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_056615.1 Gene:Crim1 / 50766 MGIID:1354756 Length:1037 Species:Mus musculus


Alignment Length:353 Identity:96/353 - (27%)
Similarity:135/353 - (38%) Gaps:79/353 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LKNQP--QIFTCFKCE-------CQNGF---------VNCRDTCPPVNDCYILDKSNGTCCRRCK 121
            |||:.  .|..|.||.       |..||         ..||:. ||.....:|   :|||     
Mouse   553 LKNKHGCDICRCKKCPELPCSKICPLGFQQDSHGCLICKCREV-PPSAGPPVL---SGTC----- 608

  Fly   122 GCSFRGMSYESGSEWND--PEDPCKTYKCVATVVTETIQKCYSQCDNNQLQPPRPGECCPTCQG- 183
             .|..|..:::...|:|  .|..|...|.:..::|..:    ..|.|..:   |.|:|||:|.. 
Mouse   609 -LSMDGHHHKNEESWHDGCRECYCHNGKEMCALITCPV----PACGNPTI---RSGQCCPSCTDD 665

  Fly   184 -------------CKI-NGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPC--PMSKQ 232
                         |.. .|:...||...:.   |.|..|.|...::.|..:.||.|.|  |...|
Mouse   666 FVVQKPELSTPSICHAPGGEYFVEGETWNI---DSCTQCTCHSGRVLCETEVCPPLLCQNPSRTQ 727

  Fly   233 IKRPDECCPRC----PQ-----NHSFLPVPGKCLFNK-SVYPEKTQFMPDRCTNCTCLNGTSVCQ 287
                |.|||:|    ||     |.|   ||..|..:: .::.....:.||.||:|.|::....|.
Mouse   728 ----DSCCPQCTDDPPQPSTSHNES---VPSYCRNDEGDIFLAAESWKPDACTSCVCVDSAISCY 785

  Fly   288 RPTCPILECAPEFQEPDGCCPRCAVAEVRSE--CSLDGIVYQNNETWDMGPCRSCRCNGGTIRCA 350
            ..:||.:.|.........|||.|....:..:  |...|..|.:.|.||:..|..|.|..|...|:
Mouse   786 SESCPSVACERPVLRKGQCCPYCLEDTIPKKVVCHFSGKTYADEERWDIDSCTHCYCLQGQTLCS 850

  Fly   351 QMRCPAVKCRANEELKQPPGECCQRCVE 378
            .:.||.:.|.  |.:| ..|.||..|.|
Mouse   851 TVSCPPLPCA--EPIK-VEGSCCPMCPE 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 19/61 (31%)
VWC 256..310 CDD:278520 14/54 (26%)
VWC 319..376 CDD:214564 19/56 (34%)
VWD 371..536 CDD:214566 4/8 (50%)
C8 580..646 CDD:285899
Crim1NP_056615.1 IB 37..>95 CDD:197525
Cell attachment site. /evidence=ECO:0000255 314..316
VWC 336..390 CDD:214564
VWC 403..456 CDD:214564
Antistasin 539..564 CDD:280912 4/10 (40%)
Antistasin 567..592 CDD:280912 4/24 (17%)
VWC 683..734 CDD:302663 18/57 (32%)
VWC 758..808 CDD:302663 13/49 (27%)
VWC 819..873 CDD:302663 19/56 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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