DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and CG13252

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_649248.3 Gene:CG13252 / 40289 FlyBaseID:FBgn0037016 Length:384 Species:Drosophila melanogaster


Alignment Length:288 Identity:56/288 - (19%)
Similarity:96/288 - (33%) Gaps:87/288 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 DPCKTYKC-----VATVVTETIQKCYSQCD---NNQLQPPRPGECCPTCQGCKINGQTVAEGHEV 197
            |.|::.||     :......:|:......|   :|.::.|...|......|...|...:::...|
  Fly    36 DLCQSVKCPPDAEMQCPADSSIRHNLLAVDLIKSNAVELPNASEMASAADGVSYNRGLISDEDYV 100

  Fly   198 DASIDDRCLVCQCRGTQLTCSKKTCPVLPCP------------MSKQIKRPDECC--------PR 242
            ...::.:| ||           |||.:..||            :.:..:.|.|||        |.
  Fly   101 QCCLNRKC-VC-----------KTCYIPDCPSDADEDVVVVELVPENNQTPGECCGTYECQAEPN 153

  Fly   243 CPQNHSFLPVPGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRPTCPILECAPEFQEPDGCC 307
            |                 :|..:.......:|..|.|.:|..:|.: ||.        :..:|.|
  Fly   154 C-----------------TVVRDTDFHWLKQCRRCKCESGLKICHK-TCD--------ERAEGVC 192

  Fly   308 PRCAVAEVRSECSLDGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPAVKCRANEE--LKQPPG 370
                      :..:.|:.|::.|.|... |::|.|..|..:|....|..:.|.:.::  ||.   
  Fly   193 ----------QSKISGMFYKDGENWTEN-CKTCECEKGEPKCTMSFCGNLNCPSEQQVMLKD--- 243

  Fly   371 ECCQRCVETAGTCTVFGDPHFRTFDGKF 398
            .||..|.......     ||.:..||.:
  Fly   244 TCCPVCWPKCAPM-----PHEKQDDGSY 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 15/78 (19%)
VWC 256..310 CDD:278520 10/53 (19%)
VWC 319..376 CDD:214564 15/58 (26%)
VWD 371..536 CDD:214566 7/28 (25%)
C8 580..646 CDD:285899
CG13252NP_649248.3 VWC 197..249 CDD:302663 15/55 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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