DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and CG17211

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_609552.1 Gene:CG17211 / 34639 FlyBaseID:FBgn0032414 Length:1354 Species:Drosophila melanogaster


Alignment Length:275 Identity:70/275 - (25%)
Similarity:96/275 - (34%) Gaps:96/275 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 GCKINGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMSK---QIKRPDECCP--R 242
            ||..||...|:...|.:.  ::||.|||....|.|..|.||.:|.|..:   .:::...|||  .
  Fly    30 GCHHNGTWFADKSVVPSM--EKCLNCQCNRKTLVCRLKVCPEMPMPPPRGCVVVQKKSSCCPYLS 92

  Fly   243 CPQNHSFLPVPGK-------------------------------------CLFNKSVYPEKTQFM 270
            |.:..:|..:|.|                                     |:.|.:||...:...
  Fly    93 CARLDAFYKIPTKRRIIAYLDHYERESIDRVVNDNMLQRRSDDSDTDLFVCVKNGTVYKSGSAMS 157

  Fly   271 PDR-CTNCTCLNGTSVCQRPTC--PILECAPEFQEPDGCCPRCAVAEVRSEC-------SLDGIV 325
            ... |:.|.|:.||..|.:|.|  |:..|.|.|.: ..|||      ||.:|       |...:.
  Fly   158 SSNLCSYCYCIGGTEKCVKPKCMLPVEGCKPIFVD-STCCP------VRYDCSSKTSGKSSQEVR 215

  Fly   326 Y---------------QNNETWDMG----------------PCRSCRCNGGTIRCAQMRC-PAVK 358
            |               |.|....:|                ||..|.|..||.|||..:| ||:|
  Fly   216 YRKTSNKHFLRMSQRLQRNRGCTVGAQFYAEGQKMRSDADKPCDICFCIRGTRRCAPKKCSPALK 280

  Fly   359 CRANEELKQPPGECC 373
               |.....|.|:||
  Fly   281 ---NCIPVVPKGQCC 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 20/63 (32%)
VWC 256..310 CDD:278520 19/56 (34%)
VWC 319..376 CDD:214564 24/94 (26%)
VWD 371..536 CDD:214566 2/3 (67%)
C8 580..646 CDD:462584
CG17211NP_609552.1 VWC 237..294 CDD:214564 19/59 (32%)
Blue background indicates that the domain is not in the aligned region.

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