DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and sog

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_476736.1 Gene:sog / 32498 FlyBaseID:FBgn0003463 Length:1038 Species:Drosophila melanogaster


Alignment Length:473 Identity:97/473 - (20%)
Similarity:144/473 - (30%) Gaps:177/473 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ALLQGRTVDAGAGDSLSGVRQSCSNEGEEVQLKNQPQIFTCFKCECQN------GFVNCRDTC-- 100
            :|::||.|.....|:        .:..|.:.||.|..      .:.||      .:::..:.|  
  Fly   577 SLIRGRLVPRPVADA--------RDSAEPILLKRQEH------TDAQNPHAVGMAWMSIDNECNL 627

  Fly   101 --------PPVND--CYILDK---SNGTCCRRCKGCSFRGMSYESGSEWNDPEDPCKTYKCVATV 152
                    .|..|  .|:.:|   :.|....|.....|.| ||..|...:.|.         |.:
  Fly   628 HYEVTLNGVPAQDLQLYLEEKPIEAIGAPVTRKLLEEFNG-SYLEGFFLSMPS---------AEL 682

  Fly   153 VTETIQKCYSQCDN---------NQLQPPR-PGECCPTC------------QGCKINGQTVA--- 192
            :...:..||.:..:         .:|:..: ||.|.|..            ....:||:|..   
  Fly   683 IKLEMSVCYLEVHSKHSKQLLLRGKLKSTKVPGHCFPVYTDNNVPVPGDHNDNHLVNGETKCFHS 747

  Fly   193 ----EGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMSKQ-IKRPDECCPRCPQNHSFLPV 252
                ...|...|..|.|.:|.|...|.:|....||.|.|..::| ::|..||||.|        |
  Fly   748 GRFYNESEQWRSAQDSCQMCACLRGQSSCEVIKCPALKCKSTEQLLQRDGECCPSC--------V 804

  Fly   253 PGK------------------------CLFNKSVYPEKTQFMP-------DRCTNCTC--LNGTS 284
            |.|                        |...:..:|....:.|       |.||.|:|  |....
  Fly   805 PKKEAADYSAQSSPATNATDLLQQRRGCRLGEQFHPAGASWHPFLPPNGFDTCTTCSCDPLTLEI 869

  Fly   285 VCQRPTCPILECAPEF-QEPD--GCCPRCAVAEVRSE---------------------------- 318
            .|.|..||.|:|:.:. ..||  .||..|...:..|.                            
  Fly   870 RCPRLVCPPLQCSEKLAYRPDKKACCKICPEGKQSSSNGHKTTPNNPNVLQDQAMQRSPSHSAEE 934

  Fly   319 ------CSLDGIVYQNNETWDMGP---------CRSCRCNGGTIRCAQMRCPAVKCR------AN 362
                  |.:...||:|.:.|.  |         |..|||....:.|.:.||....|:      :.
  Fly   935 VLANGGCKVVNKVYENGQEWH--PILMSHGEQKCIKCRCKDSKVNCDRKRCSRSTCQQQTRVTSK 997

  Fly   363 EELKQPP-------GECC 373
            ..|.:.|       .|||
  Fly   998 RRLFEKPDAAAPAIDECC 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 21/66 (32%)
VWC 256..310 CDD:278520 19/65 (29%)
VWC 319..376 CDD:214564 19/77 (25%)
VWD 371..536 CDD:214566 3/3 (100%)
C8 580..646 CDD:462584
sogNP_476736.1 VWC 102..174 CDD:278520
CHRD 200..334 CDD:214804
CHRD 341..467 CDD:214804
CHRD 473..585 CDD:214804 3/7 (43%)
CHRD 594..708 CDD:214804 22/129 (17%)
VWC 744..803 CDD:278520 18/58 (31%)
VWC 832..898 CDD:278520 19/65 (29%)
VWC 941..1017 CDD:278520 19/77 (25%)
Blue background indicates that the domain is not in the aligned region.

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