DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Vwce

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001258240.1 Gene:Vwce / 309209 RGDID:1309910 Length:930 Species:Rattus norvegicus


Alignment Length:366 Identity:106/366 - (28%)
Similarity:153/366 - (41%) Gaps:75/366 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GAGDSLSGVRQSCSNEGEEVQLKNQPQIFTCFKCECQNGFVNCRD-----TC----PPVNDCYIL 109
            |||.|      ||.:.|...:..::.:...|.:|.||:|.|.|.:     ||    ||       
  Rat   373 GAGPS------SCRHLGATYESGSRWRQPGCSQCLCQDGEVTCGEVRCDSTCSHPIPP------- 424

  Fly   110 DKSNGTCCRRCKGCSFRGMSYESGSEWNDPEDPCKTYKCVATVVTETIQKCYS-QCDNNQLQPPR 173
              |.|.||..|.||...|:....|..::.||:.|....|:|..|:     |.| :|      ||.
  Rat   425 --SEGGCCPSCTGCFHSGVIRAEGDVFSPPEENCTVCVCLAGNVS-----CISPEC------PPG 476

  Fly   174 P------GECCPTCQG-CKINGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMSK 231
            |      .:||....| |..:|:...:|.......|| |..|.|:..::.||...||.|.||..:
  Rat   477 PCKASPQSDCCTCAPGRCYFHGRWYTDGAVFSGGGDD-CTTCVCQNGEVECSFTPCPELECPREE 540

  Fly   232 QIKRPDECCPRCPQNHSFLPVPGKCLFNKSV-YPEKTQFMP-DRCTNCTC-LNGTSVCQRPTCPI 293
            .:..|.:||..|.:.   .|..|..|.:..| :|....:.| |.|..|.| .:|:..|:|..| :
  Rat   541 WLLGPGQCCFTCREP---TPTTGCSLDDNGVEFPIGQIWSPGDPCELCVCQADGSVSCKRTDC-V 601

  Fly   294 LECAPEFQEPDGCCPRCAVAEVRSECSLDGIVYQNNETWD--MGPCRSCRCNGGTIRCAQMRCPA 356
            ..|....:.|..|||.|:..     |:..|.::.||||:.  :.||.||.|..|::.|:.:.|| 
  Rat   602 DSCPHPIRVPGQCCPDCSAG-----CTYTGRIFYNNETFPSVLDPCLSCICLLGSVACSPVDCP- 660

  Fly   357 VKCRANEELKQPPGECCQRCVETAGTCTVFGDPHFRTFDGK 397
            :.|...   ..|.||||..|             |...|:|:
  Rat   661 ITCTYP---FHPDGECCPVC-------------HDCNFEGR 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 18/58 (31%)
VWC 256..310 CDD:278520 17/56 (30%)
VWC 319..376 CDD:214564 21/58 (36%)
VWD 371..536 CDD:214566 7/27 (26%)
C8 580..646 CDD:462584
VwceNP_001258240.1 EGF_CA 142..180 CDD:214542
FXa_inhibition 190..218 CDD:464251
EGF_CA 220..262 CDD:214542
PHA03247 <263..377 CDD:223021 3/3 (100%)
VWC 379..433 CDD:450195 17/62 (27%)
VWC 436..>479 CDD:450195 15/53 (28%)
VWC 494..552 CDD:450195 18/58 (31%)
VWC 565..618 CDD:214564 16/53 (30%)
VWC 622..677 CDD:450195 21/58 (36%)
PHA03247 <741..919 CDD:223021
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.