DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and Tecta

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001100284.2 Gene:Tecta / 300653 RGDID:1309824 Length:2155 Species:Rattus norvegicus


Alignment Length:900 Identity:181/900 - (20%)
Similarity:287/900 - (31%) Gaps:293/900 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CCQSSGQWKFPAQQPRKSLASRRRHTGFRPSTQLLILIA----VLLALLQGRTVDAGAGDSLSGV 62
            |...|...||...:.|..:.:...::.|.....::.:.|    .|..|.|....::...||::..
  Rat   896 CNNDSELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARY 960

  Fly    63 RQSCSNEGEEV-----------QLKNQPQIFTCFKC--ECQNGFVN--CRDTCPPVNDC---YIL 109
            ..:|.|...||           :.........|..|  .|:...:.  |.|:|.....|   |.|
  Rat   961 ASACKNADVEVGPWRTYDFCPLECPENSHFEECMTCTETCETLALGPICVDSCSEGCQCDEGYAL 1025

  Fly   110 DKSNGTCCRRCK-GCSFRGMSYESGSE-WNDPEDPCKTY-KCVAT---VVTETI-----QKCYSQ 163
            ..|.  |..|.: ||:|.|....:... |.|.:  |:.: .|..|   |..|||     ..|..:
  Rat  1026 QGSQ--CVTRSECGCNFEGHQLATNETFWVDQD--CQIFCYCNGTDNSVHCETIPCRDDDYCMEE 1086

  Fly   164 CDNNQLQPPRPGEC---------------------CPTCQGCKINGQTVAEGHE---VDASIDDR 204
            ......||.....|                     ||... |....:::::...   |.|..:||
  Rat  1087 SGLYYCQPRTDASCIVSGYGHYLTFDGYPFDFQTSCPLIL-CTTGSRSISDSFPKFIVTAKNEDR 1150

  Fly   205 -----------------------------CLVCQCR---------------------------GT 213
                                         .||...|                           |.
  Rat  1151 DPSLALWVKQVDVTVFGYSIVIHRAYKHTVLVNNERLYLPLKLGQGKINIFSFGFHVVVETDFGL 1215

  Fly   214 QLTCSKKTCPVLPCPMSKQ------------------------------------IKRPDEC--- 239
            ::....||...:..|.|.|                                    :||...|   
  Rat  1216 KVVYDWKTFLSITVPRSMQNSTYGLCGRYNGNPGDDLEMPMGLLALSINEFGQSWVKRDTFCQVG 1280

  Fly   240 ----CPRCPQNHSFLPVPGKCLFNKSVYPEKT------------QFMPDRCTNCTCLNG------ 282
                ||.|.:...|..|...|    |:.|.:.            .|....|...:|::|      
  Rat  1281 CGDRCPSCAKVEGFSKVQQLC----SLIPNQNAGFAKCHSKVNPTFFYKNCLFDSCIDGGAVQTA 1341

  Fly   283 -------TSVCQRP---------------TCPILECAPEFQEPDG--------CCPRCAVAEVRS 317
                   .|.||..               |||          |:.        |.||||...::|
  Rat  1342 CSWLQNYASTCQTQGVAVTGWRNYTSCSVTCP----------PNSHYESCVSVCQPRCAAIRLKS 1396

  Fly   318 ECS-----------------------------LDGIVYQNNETWDMGPC-RSCRCNGGTIRCAQM 352
            :|:                             .||..|:..:.:..|.| |.|||    .|...:
  Rat  1397 DCNHYCVEGCQCDAGYVLNGKSCILPHNCGCYSDGKYYEPKQLFWNGDCTRRCRC----FRRNLI 1457

  Fly   353 RCPAVKCRANEELKQPPGECCQR-----CVET-AGTCTVFGDPHFRTFDGKFFSFQGSCKYLLAS 411
            :|...:|:::|       ||..|     |..| ...|...|...||||||.|..|..:|.::|::
  Rat  1458 QCDPRQCKSDE-------ECALRSGVRGCFSTKTSYCLAAGGGVFRTFDGAFLRFPANCAFVLST 1515

  Fly   412 DCM---GKTFHIRLTNEGRGTRRASWAKTVTLSLRNLKVNLGQRMRVKVNGTRVTLPYFVVAGGQ 473
            .|.   ..:|.:.:..:...:...:....|...:...::.:..|..||||||:|.:|:..     
  Rat  1516 ICQKLPDISFQLIINFDKWSSPNLTIISPVYFYINEEQILINDRNTVKVNGTQVNVPFIT----- 1575

  Fly   474 NVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRS 538
            .:..:..::.|.:::.:...:.:.:||...:::|:..:.:.::|||||||||...||.....|:.
  Rat  1576 GLATKIYSSEGFLVIDTSPDIQIYYNGFNVIKISISERLQNKVCGLCGNFNGDMTDDYVTLRGKP 1640

  Fly   539 HGDDEVWHFANSWKVGGPK------SCSRKREFLAATPTCDK-----RKSNFYCHPLS-VPALFG 591
            .....|  .|.|||..|.:      ||: :.:|.....|||.     .:.:.||..|: :...|.
  Rat  1641 VVSSVV--LAQSWKTNGMQKRPLTPSCN-ELQFSQYAATCDNVHIQAMQGDGYCLKLTDMKGFFQ 1702

  Fly   592 ECNERLNPENYKAACRMDVCECPSGDCHCDSFAAYAHECRRLGVQLPDWRSATNC 646
            .|...|:|..:..:|.:|.|........|.|.|||...||..|:...:|....||
  Rat  1703 PCYGLLDPLPFYESCYLDGCYNHKKFQLCGSLAAYGEACRSFGILSTEWIEKENC 1757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 19/160 (12%)
VWC 256..310 CDD:278520 16/101 (16%)
VWC 319..376 CDD:214564 17/91 (19%)
VWD 371..536 CDD:214566 44/173 (25%)
C8 580..646 CDD:462584 19/66 (29%)
TectaNP_001100284.2 NIDO 98..254 CDD:214712
VWD 313..477 CDD:214566
C8 517..591 CDD:214843
TIL 597..650 CDD:460351
VWC 652..706 CDD:450195
VWD 703..865 CDD:214566
C8 905..981 CDD:214843 13/75 (17%)
TIL 984..1036 CDD:410995 12/53 (23%)
VWD 1100..1258 CDD:459671 17/158 (11%)
C8 1300..1368 CDD:462584 10/71 (14%)
TIL 1372..1425 CDD:410995 10/62 (16%)
VWD 1487..1639 CDD:459671 39/156 (25%)
C8 1685..1757 CDD:214843 19/71 (27%)
ZP 1805..2059 CDD:214579
FXa_inhibition 2089..2121 CDD:464251
Blue background indicates that the domain is not in the aligned region.

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